Raphanus sativus (radish): 130503922
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Entry
130503922 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130503922
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
130503922
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
130503922
Ribosome biogenesis [BR:
rsz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
130503922
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_31
GCD14
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
130503922
NCBI-ProteinID:
XP_056854477
UniProt:
A0A9W3CS79
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MAQLLSFRVYLSAETQKASSPDSFKRTQKTRKPFTRRQRGPVTPVRKPQNLNLEVSPHRA
VSAVRLMRIEFGGAFADLLNEKGKGSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGT
IRWRRYLDHLIGSLCHNERTFRNMEPLLLQILRIGFYEIIKLDMPAYAVVDENVRLAKIA
LRPGAGDLVNGILRKLVTLKEKDALPLPKVEGDDRAQARALATLHSHPVWMVRRWVKYLG
LDEATKLMTWNNTDPGFSLRANTGRGITRSDLVERLNSLKVPHELSLHLEEFVRIKTGLQ
IVVQAGLLKEGICSVQDESAGLVVSVVKPQPGDRILDACAAPGGKTLFMASCLKRQGMIY
AMDVNEGRLRILGETAKSHQVAGLITTIHSDLRVFAETKEVQYDKVLLDAPCSGLGVLSK
RADLRWNRKLEDMEELTNLQDGLLDSASKLVKPGGFLIYSTCSIDPEENQGRVEAFLLRH
PEFSVDPVDRLVPSSFVTSQGFFLSNPVKHSLDGAFAARLVRAL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaactgctctcgtttcgcgtctatctctctgccgaaacgcagaaagcttcttct
ccagactcgttcaagcgaacccaaaagactcgcaaaccatttacgcgtcgtcagagaggt
ccggtaactccagtgcggaaaccacagaatctgaatttggaggtttctccacatagagct
gtatctgcggtgagactgatgagaatcgagttcggtggtgcgtttgctgatcttttgaat
gagaaaggcaaaggctctgggagtaatgagatgagttatgtcgagagaacaatcggtttt
cggacacgcgatttggatgaccgggatcttagactggttactgatgttgttggaggaaca
ataaggtggaggaggtaccttgatcacctcattggttccctttgccacaacgaaaggaca
tttcgtaatatggaacctcttctcttgcagattctccgcattggtttctatgagatcatt
aagcttgatatgccagcatacgctgttgtagatgagaacgtaaggcttgcgaagattgca
ctaagacctggtgctggagatcttgtcaatgggattcttcgtaagcttgtcactcttaag
gaaaaagatgcccttccattacccaaagtggaaggggatgatcgtgcacaagcgcgtgca
cttgctacacttcattcccaccccgtttggatggttaggcgatgggtaaagtatctaggg
ttggatgaagccactaagctcatgacatggaacaacactgatcctggattcagcttaagg
gccaatacgggaaggggcattacaagatcagaccttgtggagcgtctaaactctttaaag
gttccacacgaactgtccttacacttggaggagtttgtccgcatcaaaacaggattgcag
atcgttgtgcaagctggcttactcaaagaaggcatatgttctgttcaggatgagagtgca
ggactagtagtctcagtggtgaaacctcagccaggagataggatactggacgcatgtgct
gctcctggagggaagacccttttcatggcctcttgcttgaaacgccaaggtatgatatat
gctatggatgtgaatgaagggcggctaagaattcttggggagacagcaaaatcacaccaa
gtcgctggacttatcacaactatccattcagatctccgtgtcttcgctgaaacaaaagag
gtacaatatgataaagtgttgcttgatgccccgtgttctggactcggtgtcctctccaag
agagcggatttgcgttggaaccgtaaactagaggacatggaagagcttacgaatctacag
gatgggcttcttgattctgcctccaaactggtgaagcctggtgggttcttgatatacagt
acttgctcgatagaccctgaagaaaatcaaggaagagtcgaagcgtttctcctaagacat
cctgagttctctgtagatccagtggacagattagtaccatcaagttttgtaacgtcgcaa
ggcttctttttatccaacccagtgaaacactccttggatggagcgtttgcagctcgtctg
gttcgagccttatga
DBGET
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