Raphanus sativus (radish): 130504434
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Entry
130504434 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130504434
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130504434
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130504434
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130504434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4_3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-RING_13
Motif
Other DBs
NCBI-GeneID:
130504434
NCBI-ProteinID:
XP_056855026
UniProt:
A0A6J0L0M4
LinkDB
All DBs
Position
Unknown
AA seq
185 aa
AA seq
DB search
MNGPPENDLCSICHSHFTAPCQANCSHWFCGNCIMLVWRHGSILQPCKCPLCRRPISLLV
PTEDTIRDRNDPTVTEVLADLETYNRRFGGQSTSLIQRMQDLPFLLRRLLREMMDPQRTL
PLVIRARVYIAMILSAVYIVSPIDIIPEGVLGVVGLLDDLLIALICFLHVAALYRSVLYF
RHAGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggccgccggagaacgatctttgctcgatatgtcattcccactttactgctcct
tgccaagccaattgctctcattggttctgcggaaattgcatcatgcttgtgtggaggcat
ggatctatattacagccatgcaaatgccccttgtgtcgtcgtcccataagtttgctcgtc
cctacagaggacactatcagagaccgtaatgatcctacagttaccgaggttcttgctgat
cttgaaacctacaaccgacgctttggtggacaatcaactagtttaattcagaggatgcaa
gaccttccgttcttacttcggagattgttgcgggaaatgatggatccacaaagaacactt
ccacttgtcatcagagctcgagtttatatcgcaatgattctcagtgctgtttacatagtc
agtccaatagatatcattccagaaggagttctgggggttgtcggtttgcttgatgatcta
ctcatagccttgatttgtttcctccatgttgctgctctctaccgctcggttctctatttc
cgccatgccggttcttga
DBGET
integrated database retrieval system
