Raphanus sativus (radish): 130505071
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Entry
130505071 CDS
T06014
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130505071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
130505071
Spliceosome [BR:
rsz03041
]
Complex C
Other components
Step II factors
130505071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
Tudor_3
zf-CCHC_4
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
130505071
NCBI-ProteinID:
XP_056855658
UniProt:
A0A6J0JFL2
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MATASVGFKSREEHRKKQELEEARKAGLAPAEIDEEGKEINPHIPQYMSSAPWYLNADKP
SLKHQRKWKVDPNYTKSWYDRGAKTFKADKYRKGACENCGAMTHKTKLCTERPRKMGAKW
TNKNIAPDEKIETFDLDYDGKRDRWNGYDTAKYSEVIKRYEARDEARRNFLKEQQLKKLD
KKRDNKIDEEECSDEEEEALKHDEAKADESKQMDFAKVEKRVRTTGGGSTGTVRNLRIRE
DTAKYLLNLDVNSAYYDPKTRSMREDPLPNTDPNEKFYAGDNQYRMSGEALEFKKLNIHA
LQLSEKGQEEVNMQAAPSQAELLFKKYKDAKEKLKKQIQETIMEKYGNAAASVEDIPKEL
LFGQSERDVEYDRCGRVIKGMELSVPKSKYEEDVYINNHTSVWGSWWKDHQWGYRCCQQT
VKNSYCTGVAGIEAAEEAAGLMRSNIERHATASNDRSGLVEEKRFVTWGSDTPEDVVLDR
EKLDEALKKEDERKREEKDERKRKYNVQWNDQVTPEEMEAYRMKRMHEDDPMKNLLH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagttgggtttaagtcaagagaagagcaccgtaagaagcaagaattg
gaggaagcgcgtaaagcagggcttgctccagcagagatcgatgaggaaggaaaagagatt
aaccctcacattcctcaatacatgtcttctgctccttggtacctcaatgcagacaagcct
agcttgaaacatcaaaggaaatggaaagttgatccaaactatacaaagtcgtggtacgat
agaggagccaaaacgttcaaggcagataagtataggaaaggagcttgtgagaactgtggg
gctatgacgcataagacaaagttgtgcacggagaggccaagaaagatgggagcgaagtgg
actaacaagaacatagctcctgatgaaaagatcgagacgttcgaccttgattacgatggg
aaaagggatagatggaacggttacgatactgccaaatattcggaagtgatcaagaggtat
gaggctagagatgaagcgagaaggaactttttaaaagagcagcagttgaagaagctggat
aagaaacgtgacaacaagattgatgaagaagagtgtagtgatgaagaagaggaggctctg
aaacatgatgaagccaaagctgatgagagcaagcaaatggattttgctaaggtagagaaa
cgtgttcgtactactggtggtggcagcacaggaactgttaggaacttgcgtatacgtgaa
gacactgcaaagtatcttttgaatcttgatgtcaattctgcttattatgatcccaagacg
aggtctatgcgtgaagatcctcttccaaatactgatccaaacgagaagttctatgcggga
gacaatcaatacagaatgagtggagaagctctagagttcaagaagcttaatattcacgcg
ttgcaattatccgagaaaggccaggaagaggtcaacatgcaagctgctccttctcaagca
gagctgcttttcaagaaatacaaagatgcgaaagagaaactgaagaaacagatccaagaa
acaatcatggagaagtatggaaatgctgctgcgtctgtggaagacatcccaaaggagctt
ttatttggacaaagcgagagagatgtcgaatatgaccgatgtggaagagttattaaagga
atggaactgtcggtacctaagagcaaatatgaagaagatgtttacataaacaaccacaca
agcgtatgggggtcgtggtggaaggatcaccagtggggttacagatgctgtcagcaaacg
gttaagaacagctattgcactggtgttgcggggatagaggcggctgaggaagctgcaggt
ctaatgagaagcaatatcgaaagacatgctacagcttctaatgataggtccggtctagta
gaggagaaaagatttgtgacttggggaagtgatacaccagaagatgttgttcttgaccgt
gaaaaacttgatgaagctttaaagaaggaggatgagaggaagagagaggagaaagatgaa
aggaaacgtaaatacaatgtccaatggaatgatcaggttacacctgaggagatggaagct
taccgaatgaaaagaatgcatgaggatgatcccatgaagaatcttttgcactag
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