Raphanus sativus (radish): 130505281
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Entry
130505281 CDS
T06014
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
130505281
Enzymes [BR:
rsz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
130505281
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
130505281
Prokaryotic type
130505281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
NNH2
Motif
Other DBs
NCBI-GeneID:
130505281
NCBI-ProteinID:
XP_056855853
UniProt:
A0A6J0KJK2
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MASTTAVQPGRIRILKKSSLRLPDSDQTAGPVVYWMFRDQRLRDNWALIHAVDLANRTNA
PVAVVFNLFDQFLGAKARQLGFMLKGLRQLHRQIESLQIPFFLLQGDAEETIPEFLKECG
ALHLVTDFSPLREIRSCKEEVVKRTSVSLTVHEVDAHNVVPMWAASGKLEYSARTIRGKI
NKLLPEYLVEFPELEPPKKKWVGMMVDKVVVDWDSLIDKVVREGAEVPEVEWCVPGEDAG
MEVLMGSREGFLTKRLRNYSTDRNNPVKPKALSGLSPYLHFGQISAQRCALEARKVRNTY
PQAVDTFLEELIVRRELSDNFCYYQPQYDSLEGAWEWARKSLTDHASDKREHTYSLEQLE
KGQTADPLWNASQLEMVYQGKMHGFMRMYWAKKILEWTKGPEEALSISIFLNNKYEIDGR
DPSGYVGCMWSICGVHDQGWKERQVFGKIRYMNYAGCKRKFDVDSYISYVKSLVSVTKKK
RKAEEQLTRDSIDHPKAN
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacaacggcggttcaaccgggtcggatccggatcctcaagaaaagctctttg
cgactgccggactcggatcaaacggcgggtcccgtagtttactggatgttcagagatcaa
cggctgagagacaactgggctctgatccacgccgtcgatctggcgaacaggaccaacgct
cccgtagccgtcgtgttcaatctgttcgatcagtttctgggcgcgaaggcgaggcaatta
gggtttatgttaaaaggtctccgccagctccaccgtcaaatcgaatctcttcaaattccc
ttctttctgttacagggagatgctgaggagacgatacctgagtttctcaaagagtgtgga
gctttacatttggtgactgacttctcgcctttacgggagataagaagctgtaaagaggag
gttgtcaagaggacgagtgtttcgttgacagtacacgaagtcgatgcacacaacgtggtt
ccgatgtgggctgcgtcggggaagttggagtacagtgctagaacgatacggggtaagatc
aacaaactgttgcctgagtacctcgttgagtttcctgagcttgaaccgccgaagaagaag
tgggttgggatgatggtggataaggtggtggttgattgggatagcctcatcgataaagtt
gtaagggagggtgcggaagttcctgaagttgaatggtgtgtgcctggagaagatgcgggg
atggaagtactgatggggagccgagaggggtttttgacgaaaaggttgaggaactattca
acagacaggaataatcctgtgaagccgaaagcactctctggtctatctccttatctacat
tttggacagatctcagctcaacggtgtgcattggaggcacgtaaagtcaggaatacttac
cctcaggcagttgatacgttcttggaagagttgattgtgcgaagagaactctctgacaat
ttctgctactatcaacctcagtatgattctttggagggagcttgggagtgggcacgcaaa
tcattgacggatcatgcttcagataagagagaacacacttactcgttggagcagttagag
aagggacagacagcagatcctctatggaatgcttcacagttagagatggtttatcagggg
aaaatgcacggtttcatgagaatgtattgggcaaagaagattctagaatggaccaaagga
cctgaagaggctctctcaatatccatctttctaaataacaagtatgaaatagatggtcgt
gacccgagtggatatgttgggtgtatgtggtccatatgcggcgttcacgatcagggatgg
aaagagaggcaggtgtttgggaagatacggtacatgaactacgcgggttgcaaacggaag
ttcgatgtggacagttacatctcttatgtcaagagtttggtgtccgtaacaaagaagaag
aggaaagctgaagaacagctcacaagagactctattgaccaccccaaagctaattag
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