Raphanus sativus (radish): 130505373
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Entry
130505373 CDS
T06014
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.5
KO
K14487
auxin responsive GH3 gene family
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130505373
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Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
Motif
Other DBs
NCBI-GeneID:
130505373
NCBI-ProteinID:
XP_056855950
UniProt:
A0A6J0N3Y2
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MPEAPKFESLDAFDLTLDEKNKRKLQLIEELTSNADQVQRRVLEEILTRNADVEYLRRHD
LNGRTDREIFKNVMPVITYEDIQPEINRIANGDKSPILSSKPISEFLTSSGTSGGERKLM
PTIEEELDRRSLLYSFLMPVMSQFVPGLDKGKGMYFLFIKSESKTPGGLPARPVLTSYYK
SSHFKERPFDPYTDYTSPNETILCPDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAI
KFLEKHWTELVRDIRTGTLSSLITDPSVREAVAKILKPSPKLADFVEFECKKRSWQGIIT
RLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSY
TLIPTMAYFEFLPVHRNSGVTNSINLPKALTEKEQQELVDLVDVKLGQEYELVVTTYAGL
CRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAMTHLVPFDAS
LSEFTSYADTSSIPGHYVLFWELCLDGNTPIPPSVFEDCCLAVEESFNTVYRQGRVSDKS
IGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRVVDSYFSPNCP
KWIPGHKQWGSN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggcaccaaagtttgaatctttagatgctttcgatctgaccctcgacgagaag
aacaagagaaagcttcagttaatcgaggaactgacctccaacgccgaccaagtccagaga
cgtgtcttggaggagatcttgacccgtaatgctgacgtggagtatctcaggcgacatgac
ctcaacggtcgcacagacagagagattttcaagaacgtgatgcctgttataacctacgag
gatatccagcctgagatcaacaggattgctaacggtgataaatctcctatcctctcttca
aagcccatctccgagttcctcactagctctgggacatctggtggagagaggaagctaatg
ccgacaatcgaagaagaactagacagaagatcgcttctctacagtttcttgatgcctgta
atgagccagttcgttcctggtctcgacaaaggcaaaggaatgtatttcttgttcatcaag
tctgaatccaagacaccaggaggcctacctgctcgtcctgtcttaaccagctactacaaa
tcttcccatttcaaagaaagaccctttgacccttacaccgactacacaagccccaacgag
accatcctttgccctgactcttaccagagcatgtactctcagatgctctgcggcttatgc
caacatcaggaggttcttcgagtcggtgctgttttcgcctctggtttcatcagagctatc
aagtttcttgagaagcactggaccgagctggtacgtgacatcagaaccggtacactaagt
tccctgatcactgatccttcggtgcgtgaggcggttgctaagatccttaaaccgagtcca
aaactcgcagattttgtggagttcgagtgcaagaagagatcctggcaagggattatcact
aggttgtggcctaacacaaagtatgtggatgtgattgtgaccgggacaatgtctcagtac
attccaactttggattactacagcaatggcttgcctcttgtttgtacaatgtatgcttcc
tccgagtgttactttggtgtcaacttaaggccactctgcaaacccagcgaggtctcttac
acgctcataccaaccatggcttatttcgagttcttgcctgttcatagaaactcaggtgtt
actaactccatcaatctacctaaagcactcacggagaaagagcaacaagagcttgttgat
cttgttgatgttaagcttggtcaggagtacgaactcgttgtcaccacttatgccgggctt
tgtagatacagagttggtgatttgttgagagtgactggattcaagaacaaggcacctcaa
ttcagtttcatatgccgcaagaatgtggtattgagcatagattccgacaagaccgacgaa
gttgagcttcagaacgcggtgaagaacgcaatgacacaccttgtcccatttgatgcctca
ctctctgaattcacaagctatgcggatacaagttctatccctggccattatgtcctcttc
tgggagctatgtttggatggaaacacaccaatccctccttctgtctttgaggattgctgc
ctagccgttgaagaatcgttcaacactgtttatagacaaggaagggttagtgacaagtcc
ataggcccgctagaaatcaagattgttgagccagggacatttgataagctcatggattat
gccatcagcttgggagcatctattaatcagtataagacgccgagatgcgtgaaatttgct
ccgattattgagttattgaactcaagagttgttgatagttacttcagccccaactgtcct
aaatggatccctggtcataaacagtggggaagtaactaa
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