Raphanus sativus (radish): 130506021
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Entry
130506021 CDS
T06014
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130506021
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
130506021
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130506021
Ion channels [BR:
rsz04040
]
Other channels
Mechanosensitive channel (Piezo)
130506021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
130506021
NCBI-ProteinID:
XP_056856605
UniProt:
A0A9W3CYC9
LinkDB
All DBs
Position
Unknown
AA seq
1722 aa
AA seq
DB search
MGIGTWSSFLIGFLLPSLLLAAALINWSVISFFDLIAFLLLHYIAPEIGYRFQRRHWLLW
PIFIFSFAVLVAQALYLVIWATLAPDWDTSDSSWMTVIGFIILKSWRNPTVLYFLALQLL
ASLVALADIYSSRFVRWRWSHFSQVFQQLGSHLRVASCLLLPAVQLAVGICNPSWVSLPF
FVGSCAGLVDWSLTSNVSGLFRWWRVLYIYAGFNIVLLYLYQLPINFSDMIRWIANFIGL
FTISAETQGTDICSGLFLLLFYIMLSYIRSDLEDMDFIMSMSENNLAERLLPPKYSFFIR
ESRAGVRHTNVLLRGAVFKSFSINFFTYGFLVSLFALSFWSFHFASLCAFGLLAYVGYII
YAFPSLFRLHRLNGLLLVFILLWAVSTYIFNVAFSFLNTTARKDMKIWEMVGLWHYTIPG
LFLLAQFGLGMLVALGNLVNNSVFLYLSEESSRSSNDRSYTEADEETRVLVVATIAWGLR
KCSRAIMLALIFLIAMKPGFVHAVYVIFFLMYLLSHKINRKIRKSLILLCEIHFALLYIL
EIDLVSNSLKRQGSVSREILFQLGLLRSESSWDFLEIALLACFCAIHNHGFEVLYSFSAI
VRHTPSPPIGFSILKAGLNKSVLLSVYSSPSSSYSQDNTTYERHIASFLSAIGQKFLSMY
RSCGTYIAFITILISVYLVKPNYVSFGYIFLLLFWITGRQMFEETKRRLWFPLKAYAVLV
FMFIYCLSSFVSFQLWLSGFIDLYFYLGYNSEAPLLDNVWESLAVLIVMQLYSYERRQNG
HYIPGQSSLVHPGVFGFLERFLVWHGQKILFAALFYASLSPISVFGFVYLLGLVICTAFP
KSSSVPSKSFLIYTGFLVSAEYLFQLWGMQAQMFPGQKYAELSFYLGLRVYEPGFWGIES
GLRGKVLVVAACTLQYNVFRWLERTPGLTIIKGKYEEPCPLFVSAEDTTASASSSNGENP
SSIDHASISMKQGEATSNSWSFFSPRDNQAAGFLHPTTGGSKSGSSKKFSFGHFWGSIKE
SHKWNRRRILALKKERFETQKNLLNIYLKFWIENMFNLYGLEINMIALLLASFALLNAIS
LVYIALLAACVLLRRRLIQKLWPVVVFLFASILAIEYVATWNNLLPLDQDSSETSVHCHD
CWSIAAVYFKFCRDCWLGVRVDDPRTLISYFVVFMLACFKLRADQISSFSESSTYHQMKS
QRKNSFVWRDLSFETKSMWTVLDYLRLYCYVHLLDVVLILILITGTLEYDILHLGYLAFA
LVFARMRLEILKKKNKIFRFLRVYNFVLIILSLAYQSPFVGNFNDGKCETVDYIYEVIGF
YKYDYGFRITARSALVEIIIFMLVSLQSYMFSSQEFDYVSRYLEAEQIGAIVREQEKKAA
RKTEQLQQIREAEEKKRQRNLQVEKMKSEMLNLRVQLHRMNSDSNFGFASPRTEGLRRRR
SPYLIPDSGAASPEIDGVVHRKEDQPIDEDPQYPFEAHELPMSATPEAPDSPECSFGVSP
CEITEIQQNIDVMSMEREIKKKSEGKDNPLISAVQLIGDGVSQVQFIGNQAVNNLANFLN
ISPENSDINEQSSVDDEVYDEMESQKRIHKPFERSTSLQSDMSSDGTSFQIGRILRHIWS
RMQSNNDIVCYCCFIIAFLWNFSLLSMVYLAALFLYALCVHTGPTNIFWVVMLIYTEIYI
LLQYLYQIIIQHCGLSVDAPLLNELGFPTQRIKSSFVVSSLP
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgggacatggtcgagttttctcatcggcttcctcttgccttcgctacttctc
gcagctgcacttattaactggagtgtcatctcattctttgatttgatagcttttctcctc
cttcactatattgcccctgaaattggataccgttttcagaggagacattggctattatgg
cccattttcatcttttcttttgcagtacttgttgcccaagctctgtaccttgtcatttgg
gctactcttgctccagactgggatacatcagattcttcttggatgactgttattggcttt
atcatattaaagtcctggagaaaccccactgttttgtatttcttggctttacaactacta
gcatcgctcgttgctttagctgacatttacagttctcgattcgttcgatggcgttggtct
cacttttcacaagttttccaacagctaggaagtcatcttagggttgcctcctgcttgttg
ttaccagcagttcaattggctgtggggatttgcaatccctcatgggtttctttgccattt
tttgttggcagctgtgctggactcgtggactggtccttgacaagcaacgtttctggactt
ttcaggtggtggcgagttctttatatctacgcaggattcaacattgtcctactttacctc
tatcaactaccaataaacttttccgatatgattcgatggatagcaaactttataggtcta
ttcacaatctctgcggaaacacaaggcactgatatttgttctggtcttttccttttgctt
ttttacatcatgctatcctatataaggtcagacctcgaagatatggattttatcatgtcg
atgagtgaaaataacttggcagagcgtcttcttcctccaaaatattcgttttttattcga
gaatcaagggccggtgttaggcacaccaatgttttactgaggggagctgtgtttaagagc
ttcagtatcaatttcttcacatatggtttcctggtctctctctttgctctttcgttctgg
agttttcattttgcgagcttgtgtgcttttggcctccttgcatatgttggttacattatc
tatgccttcccatcgttattccgcttgcacagattaaatggccttctgcttgtatttata
ctcttatgggctgtcagtacgtacatattcaatgtagcattttcttttctgaacactacg
gctagaaaggacatgaaaatttgggagatggtgggactttggcattacactatacctgga
ttgtttttgcttgcacaatttggtttgggaatgttggttgcgttgggtaatcttgtgaac
aactctgtttttctctacctgtctgaagagagctccagatcttccaatgacagatcttat
actgaagctgatgaagaaacaagggtgttggttgtcgcaaccattgcttggggattgcgg
aaatgttcacgggctattatgctcgcactgattttcctcattgccatgaaacctgggttt
gtccatgcagtgtatgtgatattcttccttatgtatctgttgagccacaaaatcaacaga
aagatacgcaagtcattgatccttctatgcgaaattcattttgcacttctttacattctt
gaaatcgaccttgtgtcgaactccttaaagcggcaaggctcggtgagcagagaaattctg
tttcagttaggtctccttaggtctgaaagctcttgggacttcttggagatagccttgctt
gcttgcttctgtgctatccataatcatggttttgaggtgttatattccttctcagcaatt
gtacgacatacaccaagccctccaattggatttagcatattgaaagccggtctcaacaaa
tcagttctcttgtccgtctactcatcgccatcttcaagttatagccaggataatactact
tatgagagacacattgcttcatttctgagtgcgattgggcaaaagtttctgtctatgtac
cgatcatgtggaacatacattgccttcatcactattctcataagtgtatacctggtgaaa
cccaattatgtatcgtttggatacattttccttctcttgttctggattactggaagacaa
atgtttgaggaaactaagagacgcttgtggttccctttgaaagcatatgcggttttggtg
tttatgtttatctactgcttaagtagctttgtcagcttccagctctggttatctggattt
attgatctgtacttttatttaggctacaactccgaagctccattgctggataatgtatgg
gaatctcttgctgtgttgatcgtgatgcaactttacagctatgaaaggaggcagaatgga
cattacattccaggtcaatctagtttggttcatcctggagtttttggttttcttgagagg
tttttggtatggcatggtcagaagatcttgttcgcggcattgttttatgcatccttgtct
ccaatcagtgtgtttggatttgtatatctccttggtcttgtcatctgcacagccttccca
aagtcttcgtcagtaccatccaaatcatttttgatctatactggatttctcgtgtctgct
gagtatctattccaactgtggggcatgcaagctcagatgttccctgggcaaaaatatgcc
gagttgtctttctacttgggccttcgagtatatgaacctggattttggggtatagaatca
ggtctacgaggcaaagtgctggttgttgctgcctgtactctgcagtacaatgtatttcgt
tggctagaaaggacacctggtttaactattatcaaaggtaaatatgaagagccttgtccc
ctatttgtctctgcagaagacacaactgcaagtgcttccagttctaatggtgaaaaccca
tcttccatagatcatgcttctatatcaatgaaacaaggcgaggctactagtaactcatgg
tctttcttctctccccgtgataatcaggcagctggtttcttgcatcccacgactggaggc
tccaaaagtggcagtagtaagaaattttcatttggtcatttctggggaagcatcaaggag
agtcacaagtggaacaggaggcggattctggcattgaagaaggagaggtttgaaacgcag
aagaatctgttaaatatttacttgaagttttggattgagaacatgtttaacctctatggc
cttgagataaacatgatagcgctgcttcttgcaagttttgctttgctgaatgccatctcc
ttggtatatattgcgctgcttgctgcatgtgtcctcttgagaagacgcctaattcagaaa
ctatggcctgtcgttgtttttctgtttgcatcaattctcgcaattgaatacgttgccacg
tggaataacttattgcctttagatcaggattcaagtgaaactagcgtgcattgccatgac
tgctggagtattgcagctgtctactttaaattttgccgggactgctggcttggagtgaga
gttgacgatccccggacccttattagctatttcgtggtgttcatgcttgcctgttttaaa
cttcgggctgatcagatatctagtttctcagagtcatcgacatatcatcagatgaagtct
caaagaaagaactcatttgtctggagagatctctccttcgaaacaaagagcatgtggacc
gtgcttgattacctgaggctttattgttacgtccatctgttggatgttgtgcttattctg
attctaatcacaggaactctcgagtacgacattctacacctgggctatcttgcattcgca
cttgtttttgcccggatgcgacttgaaatactgaagaagaagaacaaaatattcaggttc
ttgcgggtgtacaattttgttctcatcattctttccctcgcatatcagtctccgtttgtt
ggaaacttcaatgatggaaagtgtgaaactgttgattatatttacgaggttattggattt
tacaagtatgattatgggtttcgaatcactgcaagatctgctctcgttgaaatcatcata
tttatgttagtatctcttcagtcctacatgttttcctcccaggagtttgattatgtgtcg
cggtatcttgaagcggagcaaattggtgctattgtgcgggagcaagagaagaaagcagca
cggaagaccgaacaattgcaacagattcgtgaggctgaagaaaagaaacggcagcggaat
ttgcaggtggaaaagatgaagtcggaaatgttgaacctgcgggtacagcttcacagaatg
aattctgattctaattttgggtttgcttctccgcgcactgaaggtctacgaaggaggagg
agtccgtatctaattccagatagtggtgcagccagtccggagattgatggagtggtccac
aggaaagaagaccagcctattgacgaggatccacaatatccttttgaagctcatgagctt
cctatgagtgccactccagaagcaccagattctccagagtgttcatttggagtatctccc
tgtgaaatcactgaaattcaacagaatattgatgtcatgtctatggagcgtgaaataaaa
aaaaagtccgaaggaaaagataatccgttgatctctgctgtgcaactcatcggtgatggt
gtttcccaggtgcaatttattggaaatcaggcagtaaataaccttgcgaatttcttaaac
atctcaccggaaaattcagatataaatgagcagtcctctgttgatgatgaggtgtatgat
gagatggaaagccagaagagaatacacaaaccttttgaacggtcaacatctctgcagtct
gacatgagtagtgatggcactagctttcagataggaaggatccttcgtcatatatggtct
aggatgcagtccaacaatgatattgtttgctattgctgctttattattgcgtttctgtgg
aacttcagtcttctttccatggtctatctagcagcgcttttcctatatgccctctgcgtt
cacactggaccaactaacatcttctgggtcgtcatgctaatttacacagaaatctatatc
ctcctccagtatttataccagattataatccagcactgtgggttgagtgttgatgcacct
cttcttaatgaactgggatttccaacacaaagaatcaaatcatcatttgttgtcagctcg
ttgcct
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integrated database retrieval system
