Raphanus sativus (radish): 130506297
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Entry
130506297 CDS
T06014
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03030
DNA replication
rsz03410
Base excision repair
rsz03420
Nucleotide excision repair
rsz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130506297
03410 Base excision repair
130506297
03420 Nucleotide excision repair
130506297
03430 Mismatch repair
130506297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
130506297
03036 Chromosome and associated proteins [BR:
rsz03036
]
130506297
03400 DNA repair and recombination proteins [BR:
rsz03400
]
130506297
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130506297
DNA Replication Termination Factors
ELG1-RFC complex
130506297
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130506297
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130506297
Check point factors
HRAD17(Rad24)-RFC complex
130506297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
Rad17
RCF1-5-like_lid
RuvB_N
Mg_chelatase
AAA_11
AAA_16
AAA_14
AAA_5
ResIII
DEAD
SLFN-g3_helicase
AAA_24
nSTAND3
AAA_28
PhoH
AAA_2
AAA_19
AAA_7
AAA_30
RNA_helicase
Parvo_NS1
AAA_25
NPHP3_N
AAA_18
DUF815
IstB_IS21
TIP49
AAA_assoc_2
CFAP300
bpMoxR
NB-ARC
Motif
Other DBs
NCBI-GeneID:
130506297
NCBI-ProteinID:
XP_056856904
UniProt:
A0A6J0KTQ4
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MARVVESTQPWVEKYRPRQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNYRQGGYPCPSFKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
NRILHICNEEGLNLGGEGLSTLSSISQGDLRRAITYLQSGARLFGSTITSRDLLDVSGVV
PLEVVERFFTACKSGDFDIANKEVDNIVAEGYPASQITNQLFDIVVEAGDDITDNQKAKI
CKCLAETDKRLVDGADEYLQLLDVASNTIRALSEMAQDF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagttgtagagagcacacagccatgggttgagaaataccggccgaggcaggtg
aaggacgtggcgcatcaggaggaggtggttcgtgtcctcaccaacactctcgagactgct
aactgtccgcacatgctcttttatggaccgccaggaaccggaaagaccactactgcactt
gctatcgcacaccaactatttggccctgaattgtacaagtctagggtgttggagctgaat
gctagtgacgacagagggattaatgttgttcgcacaaagatcaaggattttgctgctgtt
gctgttggctccaactaccgtcaaggcggttacccttgcccatcgtttaagatcatcatc
ctagatgaggctgattctatgacggaagatgctcagaacgccttgaggcgcacaatggaa
acttactccaaagtcaccagattctttttcatatgtaactatatcagcaggatcatagag
cccctagcttcaagatgtgcaaagttcaggttcaaaccactttctgaagaagtcatgagt
aaccgtatattgcatatatgtaatgaagagggtctcaaccttggtggagagggtctttca
actttgagctccatctcacaaggtgatcttcgtagagccatcacgtatctgcagagtggc
gctcgattgtttggatcaacaataacttctagagatttactcgatgtgtctggggtagtt
cctctggaggtagtagagagattttttacagcatgcaaaagtggtgatttcgatattgca
aacaaggaagtggacaacatagtcgcagaaggatatcctgcatctcaaatcaccaatcag
ttatttgatatagtcgttgaggctggtgatgacataacagacaatcaaaaggctaagatc
tgcaaatgtctagctgaaacagataagcgacttgtagatggtgcggatgagtatctgcag
cttctggacgtagcaagcaatacaattcgtgcactctcagaaatggctcaagacttctga
DBGET
integrated database retrieval system
