Raphanus sativus (radish): 130506362
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Entry
130506362 CDS
T06014
Name
(RefSeq) nuclear poly(A) polymerase 1-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130506362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130506362
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
130506362
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
130506362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
130506362
NCBI-ProteinID:
XP_056856982
UniProt:
A0A9W3CZP7
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MANVQQNGQRYGITEPISLGGPTELDVVKTRELEKYLQDVGLYEGNEEAVRREEVLGRLD
QIVKTWIKTISRAKGLNDQLLHEANAEIFTFGSYRLGVHGPGADIDTLCVGPRHATREGD
FFGELQRMLSEMPEVTELHPVPDAHVPLMGFKLNGISIDLLYAQLPLWVIPKDLDISQDS
ILQNADEQTVRSLNGCRVTDQILRLVPNIENFRTTLRCMRFWAKRRGVYSNVSGFLGGIN
WALLVARICQLYPNALPSMLASRFFRVYTQWRWPNPVLLCSMDEGSLGLQVWDPRRNPKD
RLHMMPIITPAYPCMNSSYNVSASTLRIMTGEFQRGKDICEAMEANKADWDTLFEPFAFF
EAYKDYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHTHDYQDASRP
LHCSYFMGLQRKQGVPAAGGEQFDIRRTVDEFKHTVNGYMLWIPGMEISVNHIKRRSIPS
FVFPGGVRPSHTSKGTWDSKRRSENRISSTASEATTATTNEASSESKAGSHSSGDGMKRK
RGDDETITNQLRNSKHVAVSVPVENGEGLSPDPSGGSICSSPLKDCCTNGKSDLVTKVPP
ENVVLFSKDPIEKIATPQPPSQETEELEDSFDFGNQVIEQISNKDTISAASATIPPLEAT
TSNGSPFSNGEVEELEVVPMRQPEVTHRASVQQRKPIIKFSFTSLGKTNSK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgtccagcagaatgggcaaaggtatggtattacagaacctatctccttggga
ggaccaacagagcttgatgtggtcaagacacgagagcttgagaagtacttgcaagatgtt
ggattgtatgaggggaatgaggaagcggttagaagggaggaggttctagggagactagat
cagattgtcaaaacatggattaaaaccatcagccgtgccaaagggttgaatgatcagctg
cttcatgaggcgaatgcagagatatttactttcggttcttatcgtctaggggtacatggt
cctggtgctgatatagacactttgtgtgtggggcctagacatgcaaccagagaaggcgat
ttctttggtgagctacaaaggatgttgtctgaaatgcctgaagtaactgagctgcaccct
gtgcctgatgctcatgttcccttgatgggattcaaacttaatggaatttctatagatctt
ctgtatgcacaacttccgctctgggttatacctaaggacttagacatatctcaggattcc
attctacagaatgctgatgagcaaacagttcgaagcctcaacggctgtagagttactgac
cagatcttgcgtctggttcctaacattgagaatttcaggacaacattaagatgcatgagg
ttttgggctaagcgacgtggagtatactccaatgtctctggattccttggtggtataaac
tgggcgttgcttgtagctcggatttgtcaactttatcctaacgcactcccaagtatgcta
gcgtctaggttctttagggtctacactcaatggcgttggccaaatcctgtccttctctgc
tctatggatgaaggatccctcggtcttcaagtttgggatcctagaagaaacccaaaagac
aggttgcacatgatgcccatcattactcccgcttatccttgtatgaactccagttataac
gtctctgcaagtaccttgcgtattatgacaggagagtttcagagaggcaaagatatatgc
gaggctatggaagcaaacaaagctgactgggataccctttttgagccatttgcattcttt
gaagcttataaagactatcttcagatcgacatctctgctgcaaatgttgatgatctaaga
aaatggaaaggttgggttgagtcacgtctcagacagctcacactgaagattgagagacat
acttatgacatgctgcaatgccatccgcacacacacgattatcaagacgcatctcgacca
ctccattgctcttacttcatgggtctgcagcggaaacaaggagttccagcagcaggagga
gagcaattcgatatcagaagaaccgtcgatgagtttaaacacactgttaacggttacatg
ctgtggattcccgggatggagattagtgtcaaccatataaagcgaagaagcataccgagc
tttgtgtttcctggtggagttagaccttcacatacctccaaaggaacatgggacagcaaa
cgccgttcagagaacaggatttcttctacagcgagtgaagctactactgctactactaat
gaagcgagttctgaaagtaaagctggctctcacagttcaggagatgggatgaagagaaaa
cggggagacgatgagacgatcactaatcagttgaggaactctaaacacgttgcagtttca
gtgcctgtagagaatggtgaaggcctgagtccggatccatctggtggatccatttgctct
agtcctctgaaagattgttgtacaaacggtaaatctgatctcgtcactaaggttccacca
gagaatgttgttcttttcagtaaggatcctatagagaagattgccactcctcaacctccg
agtcaagaaacggaggagcttgaagacagttttgattttggaaaccaagtgattgagcag
atttcaaataaggatacaatctcggcggctagtgcaacaatacctccgttggaagccact
acttcaaatggctcaccattctccaatggagaagtggaagaactcgaggttgtaccaatg
cgacagcccgaggtgacgcatagagcttcagtgcaacagcgcaaaccgataatcaaattt
agcttcacgtctctaggcaaaaccaacagcaagtaa
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