Raphanus sativus (radish): 130506445
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Entry
130506445 CDS
T06014
Name
(RefSeq) WD-40 repeat-containing protein MSI5-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03082
ATP-dependent chromatin remodeling
rsz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130506445
03083 Polycomb repressive complex
130506445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
130506445
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
130506445
Histone modification proteins
HAT complexes
HATB complex
130506445
HDAC complexes
Sin3A-HDAC complex
130506445
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
130506445
PRC2.2
130506445
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
130506445
Heterochromatin formation proteins
Other heterochromatin formation proteins
130506445
Chromatin remodeling factors
NuRD complex
130506445
NuRF complex
130506445
NuRF complex (fruit fly)
130506445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
130506445
NCBI-ProteinID:
XP_056857071
UniProt:
A0A6J0MJJ0
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MGSEVAATTRRETEAPATYIGLKTRARTLKLNNGSVSASSQQQGSTEIKKKKKESHKPTV
DKKYSQWKTLVPILYDSLSNHSLVWPCLSCRWGPQFEQASSKNQQRLYLTEQTDGNVPNT
LVVANCEAVKKQLNREACSPLVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWD
TETQPDRHAVVGAPHSRPDLILTGHQDNAEFALAMFPTEPFVLSGGKDKLVILWSIEDQI
TAAGTDSKSHGSSIKQSGEDSSKTGGRSVGPRGVYHGHEDTVEDVAFCPSSAQEFCSVGD
DSCLILWDARTGTCPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRLFDRRNLTSN
GVGSPIYKFEGHKASVLSVQWSPDKLSVFGSSAEDGLLNIWDYDRVGKKSARAPKSPAGL
FFQHAGHRDNVVDFHWNVLEPWTIASVSGNCESNGGGGSCRYGG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgaagtagcagcgacgacgagaagagaaacagaggctccggcgacgtacatt
ggactgaagacgagagctcggacacttaaacttaacaacgggtctgtgtcagcatcttcg
cagcagcagggaagcaccgagatcaaaaagaagaagaaggagagtcacaagcccaccgtt
gacaaaaagtactctcagtggaagactcttgttcccattctctatgactcactctccaac
catagcctcgtctggccttgtctctcttgcagatggggaccacagtttgagcaagcctcg
tctaagaatcagcagcgtctctatctcacggagcaaactgatggaaatgtgcctaatacc
ttggtcgtagctaattgcgaagctgttaagaagcagcttaacagagaagcatgctctcca
ttggtgaagaagtacaagacaatcatccaccctggagaggtcaacagaatcagggaactt
ccacaaaatagtaagattgtagctactcacaccgacagtcctgatgttctcatctgggac
actgagactcaaccagatcggcatgctgtggttggagctccacattctcgtcctgatttg
atactaactggacaccaggataatgctgaatttgctcttgcgatgttcccaaccgaacct
tttgttctttctggaggcaaggacaagttagttattctgtggagtatcgaagatcagatc
acagcagctggtacagattccaaatctcatggttctagcatcaaacagagtggtgaagat
agtagtaaaactggtggtcgctccgttggccctcgaggtgtatatcatggccacgaggat
acagttgaagatgtggcgttctgtccatctagtgcccaggagttctgcagtgttggtgac
gactcttgtcttatactgtgggatgcgcgaaccggcacatgtcctgccatgaaggttgag
aaagcacatgatgctgatcttcactgtgtcgattggaatcctcatgacaacaatctgatc
ctgacagggtcagcagataacactgtccgtttgttcgaccgccgaaacctgacctcaaat
ggagttggctctcctatctacaaatttgaaggccacaaagcttctgttctttctgttcag
tggtctcctgataaattatctgtttttgggagttctgcagaagatggtctcttgaacata
tgggattatgatagggtcggcaagaagtctgcgcgtgcacccaaaagccctgctgggctt
ttcttccagcatgctggtcacagggacaacgtggtcgacttccactggaacgtattggaa
ccttggactattgccagcgtttctggtaactgtgagagtaacggtgggggtggtagctgc
agatatggcggatga
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