Raphanus sativus (radish): 130506456
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Entry
130506456 CDS
T06014
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130506456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130506456
03036 Chromosome and associated proteins [BR:
rsz03036
]
130506456
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
130506456
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
130506456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Ge1_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
RMC1_N
Beta-prop_RIG_1st
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_VPS8
WDR54
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
130506456
NCBI-ProteinID:
XP_056857088
UniProt:
A0A9W3D003
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MDAGMNTSTHLKAQARCPLQEHFLPRKNSKENLDRFIPNRSAMDFDYAHFALTEGNKGKD
QTDQVSSPSREAYRKQLAETMNLNHTRILAFRNKPQAPLDLLPTDHSASSLHHQPKSVKP
RRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALGHTVYLWDASTGSTSELVTVDE
EKGLVTSINWAPDGRHVAVGLNNSEVQLWDSGSNRQLRTLKGCHQSRVGSLAWNNHILTT
GGMDGQIVSNDVRIRSHIVETYSGHTQEVCGLKWSGSGQQLASGGNDNVVHVWDRSVASS
NSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQ
VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASA
AGDETLRFWNVFGAPETAKKAAPKAVHEPFSHVNRIR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtatgaacacatctacgcacttgaaggctcaagctcgttgccctcttcaa
gaacacttccttccccgtaaaaattccaaggaaaatctggacagattcataccaaacaga
tcagctatggatttcgactacgctcacttcgccctaaccgaaggaaacaaaggtaaagac
cagacagatcaggtaagctcaccatccagagaggcctacaggaagcaactcgctgagacg
atgaacctgaaccacacacggatcctcgccttcaggaacaaacctcaagctcctctcgac
ttgcttcccaccgaccactctgcttcttctcttcaccaccaacccaaatccgttaagcca
agaagatacattcctcagacttctgagaggacgttggacgcacctgacattgttgacgac
ttctacctcaacttgcttgactggggcagtgctaatgtcttggccattgcgttgggacac
actgtttatctctgggatgcttccactggctccacgtctgagcttgtcaccgttgatgag
gagaaaggactggtcacgagcatcaactgggcgcctgatggtcgtcatgttgcagttgga
ctcaacaactccgaagtccagctttgggattctggatccaaccgtcaactgaggacattg
aaaggttgccaccagtctagagtaggatcactggcgtggaacaaccacatcctcacaacg
ggtgggatggacggacagatcgttagcaacgacgtgcgcatcagatcacatatcgtggag
acttacagtggacacactcaagaggtttgtggcctcaagtggtcaggatccgggcagcag
ctagcgagcggtggcaacgacaatgttgtgcacgtatgggatcgttccgtggcctcctcg
aactcgaccacgcagtggcttcacaggcttgaggaacatacctctgctgtgaaggctctt
gcgtggtgccctttccaggcgaatttgctagcgaccggtggtggtggaggggacaggacg
attaagttctggaacactcacacgggggcttgcttgaactcggtggacactggctcccaa
gtttgttctttgctgtggagtaagaatgagagagagttgcttagctcgcatgggtttact
cagaaccagcttacgttgtggaagtacccgtctatggtgaagatggctgagctcactggt
catacatcaagagttctgtacatggcccagagtccagatggttgtacagtagcttcagca
gcaggagacgagacactgagattctggaatgtgtttggagcaccagagacggccaagaaa
gcagctccaaaagcagtccatgagccattctctcatgtgaaccgtattcgttga
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