Raphanus sativus (radish): 130506466
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Entry
130506466 CDS
T06014
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03440
Homologous recombination
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130506466
03460 Fanconi anemia pathway
130506466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130506466
03036 Chromosome and associated proteins [BR:
rsz03036
]
130506466
03400 DNA repair and recombination proteins [BR:
rsz03400
]
130506466
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130506466
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130506466
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
130506466
FA (Fanconi anemia) pathway
Downstream FA components
130506466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
130506466
NCBI-ProteinID:
XP_056857098
UniProt:
A0A9W3D010
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MSTWQLLPDSSGDGFRWEAAGRILPPGKSENSPPSTAPPLPSMADLLLRGCSKLIEPEVS
KPTLFTTALGKSVALKESSISKAKSILADSEDNALSRETEFGVPNSFFQTASNKKVNVSS
AGMARAKALLGLEEEDDYSGFKHVNRLRTPETFGATSVQHRSVAPGGHYEEGQRSEILSS
SPKVPQTKFQTAGGRSLSVSVEALNRARSLLGDPELGPFFDDSATGDHFVTPQKDRWIGG
DIPHEAKASNKHTSNSFISPLQSSSKQFRSVKLEDVASGVNLIKKFDAAVDEAHGISNNR
PLASDMAVNNKTGNGFISRATEFGRQAHQPLVDITNRSDIAYANNRQESSQKKRLGKTVS
VPPFKRPRTSSFKTPLMKNDQHASIGLSVVSCDTQYSKKVLSTRPEERSLRIYIKDYFGM
PPTATTKMDVPEHVRRIKSSNADKYVFGDVSSSSVVGAETFRQMLAESGASLQRASREWV
TNHYRWIVWKLACYETYYPAKCRGNFLTITNVLQELRYRYEREVNHGHCSAIKRILSGDA
PASSMMVLCISAINPKTRETHGSDSGSNVKIELTDGWYSINAALDVMLKKQLNAGKLFIG
QKLRIHGAGLSGWTTPTSPLEAVISNTICLLLNINGTYRAHWADRLGFCKEAGVPLALNC
IKCNGGPVPKTLAGITRI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagctattacccgattcaagcggcgacggtttccggtgggaagccgct
ggccggattcttccgcctggcaaatccgagaattctccgccatcaacagctcctcctcta
ccttccatggccgatctcttgctccgaggatgctcgaaacttatagaaccagaggtatcg
aagccgacactgttcacgactgctctgggcaaatctgtagctcttaaagaatcttcgatt
tccaaagccaaatcgattttagcagattcagaggataatgctctctccagggagactgag
tttggtgttcccaactcttttttccagactgcttctaacaagaaggttaatgtgtcttct
gctggtatggcaagagccaaggcattgttaggactagaagaagaagatgattatagtgga
ttcaaacacgtgaaccgtttaagaactcctgagacgtttggtgctacatcggttcagcat
cgttctgtagctccaggaggacattatgaggagggtcaaagatctgaaattttgagttca
tctccaaaggttcctcaaacaaagtttcaaactgctggtgggaggtcattgtcagtgtca
gtcgaagccttgaatcgtgcaagaagccttcttggagaccctgagttagggcctttcttt
gacgattcagcaacaggtgatcactttgttacaccacagaaagatagatggataggtggt
gatattcctcatgaagcaaaggcgagcaacaagcatacatctaatagttttatatctcct
ctccaatcatcttcaaagcaatttagatcagtcaaactggaggacgtagcttcaggggtt
aatttgatcaagaaatttgatgcggctgttgatgaggcacatgggatatcaaataacagg
cctttagcatctgatatggcagttaataataaaacgggaaacggtttcatttcaagagct
acggaattcggaagacaagctcaccagccacttgtggatatcacaaatcgcagtgatata
gcttatgcaaacaatagacaagaaagcagccaaaagaaaagactgggaaagacagtctct
gttcctccttttaaaaggccgagaacctcctcctttaaaacccctctaatgaaaaatgac
cagcatgcttcaattggtttgtctgtcgtatcttgtgatacacaatattccaaaaaggtg
ctttccacaagacctgaagaaaggtctctaagaatatatatcaaggattattttggaatg
cctccaacagctacgaccaagatggatgtgccagaacatgtcagaagaatcaaatcaagt
aatgcagataaatatgtgtttggtgatgtgtcttcctcaagcgtggtgggagctgaaact
tttcgtcaaatgttggcagagtctggtgcttccttacaacgtgcatctagagagtgggtc
accaatcactacaggtggatagtctggaaactcgcatgctacgagacatactacccagcc
aaatgcagaggaaactttctgacgatcaccaatgttctccaggaactaagatatagatat
gagagagaggtcaatcatggtcactgctctgcaataaagaggattctgagtggtgatgct
ccagcttcttcaatgatggtgctctgcatatctgctattaatccaaagactcgagaaaca
catggttctgatagtggcagcaatgtgaaaatagaactcactgatggatggtattcgata
aatgctgctctggatgtcatgctgaaaaaacagttgaatgctggaaaattgtttattggg
caaaagcttcggatacatggggcaggactttctggctggactaccccaacatcacctctt
gaggcagtgatttcgaatacaatctgtttgttgttgaatattaatgggacatacagagct
cactgggcggaccgactaggattctgtaaagaagctggtgtccctctggctctcaactgt
atcaagtgcaatgggggccctgtgcctaaaacgttagctggaattacacgaata
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