Raphanus sativus (radish): 130506763
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Entry
130506763 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130506763
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
130506763
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130506763
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130506763
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130506763
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130506763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
130506763
NCBI-ProteinID:
XP_056857429
UniProt:
A0A6J0KX85
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MGKKAKKKASRSPTKENHSKKVSEQPSETGEIAEGDAVQAVKEKQACVHFGKGVNLDKML
ERIKSSPQIKCQECKEGVRGAKAKGNKGKHAFSSSAAAEPKADKKAIWVCLECGAFVCGG
VGLPTGAQSHVVRHIRLTRHRLMIQWENPQLRWCFPCQSLLPVEKEENGEKKDVLVEVVK
LMKERSLNSLAPSDAEEQSSGSGSITSDIKLQGAAVTSSGIEARDGYVVRGLVNLGNTCF
FNSIMQNLLSLDQLRDHFLKEDASGIVGSLASSLRKLFTETKPEAGLKSVINPRVFFGSF
CVKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKKRGVSDNDEKSTTLIESVFGGETSS
IVSCIECGHSSKVYEPFLDLSLPVPFKKTPPKKLQTVSLAKKAKLPPKRVTKHASKVSEV
SKVLPAKALSDLKSPGKAAVVTGDSDASSSSVAPIDNGTVSETHSVDKQASESVTQCDTV
FDSFWLDIIGPEPLGDETNVDTEDNVSDKITTTEANQILPGPNIPSNASISLADQTLEGN
AERLMQDNDESAKAETILDEKDVQATQPDECTATSGVSTEINQASCTGGDPGLGESSSSV
NPWDEEELPLMVADSQVLYMPYKENISYDDKPGEGEASSSSFVAGDHEPQDNDFVGLGGL
FDEPEVTEGPVVFGPPCKAEASSGGVGFMAFSSESDPEEIDDSDSPVSVERCLAHFTKPE
VLSDDNAWNCENCSKNLKLQRLREKRNSKKEDSRSSNNTSNGWVSEIEDGEADGSAVKQD
PSDGSSNVNDNGREAMSSNSANDSESDGSQDEGGEDSEKVITVKRDATKRVLINKLPPVL
TIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEAPPVYRLAGLVEHSGTMRG
GHYVAYVRGGGQKGKESVWYNVSDAHVRQVSLDKVMHSEAYILFYERFFTQD
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagcgaagaagaaggcctcccgatccccaacgaaggagaatcactccaag
aaggtctctgaacagcctagtgagaccggggaaatagctgagggagatgcagttcaagca
gtcaaggagaaacaagcttgtgttcatttcggtaagggtgttaatttggataaaatgttg
gagaggatcaagtcttccccgcagattaagtgtcaagaatgcaaggaaggggtgagagga
gctaaagcaaagggtaataaggggaaacatgctttttcttcttctgctgctgctgagcca
aaagctgacaaaaaggctatttgggtttgtttggaatgtggggcttttgtctgtggaggt
gttggtctgccaaccggagcgcagagtcatgttgtcaggcacattagattgactcgccac
cggttgatgattcaatgggaaaaccctcagttaagatggtgctttccgtgccagtcgttg
ctccctgttgaaaaagaagagaacggtgagaagaaagatgtgttggtggaggttgtaaaa
ctgatgaaagagcggtctttgaacagtttagctccatctgatgccgaagagcagagctca
ggaagtggcagtatcactagtgacatcaaattacaaggtgctgctgtgaccagtagtggt
atagaagcaagagatggttacgttgtgcgagggttagttaaccttgggaacacatgtttc
tttaactcgataatgcagaatcttctttccttggatcagttacgtgatcactttttaaag
gaggatgcgtctggtatcgttgggtcacttgcttcttccctcagaaaattatttaccgaa
acgaaaccagaagcagggttaaagagtgtgataaaccctagagtcttttttgggtctttc
tgtgttaaggcaccacagtttagaggatacgaccagcatgacagtcacgagctgctacgc
tgtttgctagattccttgagcaccgaagaatcagcattgagaaagaagcgtggtgtttct
gataacgatgagaaatctactactctcatagaatctgtattcggaggcgaaacgtctagc
atcgtttcttgcattgagtgtgggcattcatcaaaagtctatgagccgttcttggatctc
tctttacccgtaccgttcaagaaaacccctcctaaaaagctgcaaaccgtttctctagca
aagaaagctaagcttccaccaaaaagagtcactaagcatgcgtcaaaggtgagtgaagtt
tcaaaagtcctcccagctaaggctctgtcggatctgaaatctcccggaaaagctgcggtt
gtcacaggtgattcagatgcatcctcttccagtgtagcgccaattgataatggtacggtc
tcagagactcattctgttgataagcaggcctcagaaagtgtaacacaatgtgatactgtt
ttcgatagcttctggttggatattattggaccagaaccccttggagatgagacgaatgtg
gatacggaagataatgttagtgacaaaatcacaactactgaggctaatcaaattcttcca
ggtccaaatattccttccaatgcctcaatttcgttggctgatcagactttggaaggtaac
gcagagaggctgatgcaagataatgacgaatctgcaaaggcagaaaccatcttggatgaa
aaagatgtacaagctacgcagcctgatgaatgcacggctacgagcggtgtttctactgaa
atcaatcaagctagttgcactggtggtgatcctggtttaggtgaaagttcttcctcggtg
aatccttgggatgaggaagagcttcctctgatggtagcagactcgcaagttctgtacatg
ccatacaaagaaaacatatcctacgatgataaaccaggcgagggtgaggcatcatcatcg
tcatttgttgctggtgatcatgaaccgcaagacaatgattttgttggtttaggcggttta
tttgatgagcctgaggttactgaagggcctgttgtttttggacctccttgtaaggctgaa
gcttcttcgggaggtgttggttttatggcgttcagcagcgagtctgatcctgaagaaatc
gatgactcggattcacctgtgtctgtagagaggtgcttggctcatttcactaagcctgag
gttttgtcggacgacaacgcttggaactgcgagaactgctcaaagaacctgaaactccaa
cggttgagggaaaagagaaactccaagaaagaagattcgagatcaagcaacaataccagc
aatggatgggtgagtgaaattgaagatggagaagccgatggttctgctgtgaagcaagat
ccaagtgatggttctagtaatgtcaatgataatggaagagaagctatgagttctaactca
gctaacgacagtgaatccgatggaagtcaagacgaaggcggcgaagactctgagaaagtg
ataacagtgaaaagagatgcaactaaaagagtacttataaacaaacttccacctgtctta
accattcatctaaagcgattcagccaagacctgcgtggtaggctaagtaagttaaatggt
catgttgctttcaaagaagtcatcgatcttcgacagtatatggactcaaggtgcagcgga
gaagctccgccagtttatagattggcgggattggtggagcattcagggacgatgagagga
ggtcactatgtggcctatgttagaggaggaggtcagaaaggaaaagagagtgtgtggtat
aacgtaagcgatgcacatgtccgtcaggtttcgttggacaaggttatgcattcagaagcg
tacatcttgttctacgaacgtttcttcacacaagactaa
DBGET
integrated database retrieval system
