Raphanus sativus (radish): 130506772
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Entry
130506772 CDS
T06014
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
rsz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130506772
09124 Replication and repair
03420 Nucleotide excision repair
130506772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
130506772
03400 DNA repair and recombination proteins [BR:
rsz03400
]
130506772
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130506772
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130506772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
Zn_ribbon_GTF2H2
VWA_2
Tfb4
IBR
Spore_GerAC_N
Motif
Other DBs
NCBI-GeneID:
130506772
NCBI-ProteinID:
XP_056857439
UniProt:
A0A9W3D107
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MAIMAKHVEAFIREFFDQNPLSQIGLVSIKNGIAHTLTDLGGSPESHIQALMGKLEAAGD
SSLQNALELVHEHLNQIPSYGHREVLILYSALSTSDPGDIMETIQKCKKSRLRCSVIGLS
AEMFICKHLCQETGGLYSVAVDEVHLKDLLLEHAPPPPAIAEFAISNLIKMGFPQRAAEG
SMAICSCHKEVKIGAGYTCPRCKARVCELPTECTICGLTLVSSPHLARSYHHLFPIAPFD
EVPTLTSSNDPRRKLGKSCFGCQQSLLGAGNKPGPCVTCRKCKHYFCLDCDIYIHESLHN
CPGCESIHRPKSVSLMEE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcaataatggcaaaacatgttgaagctttcattagagagttttttgaccagaatcct
ctgagtcagatcggtctggtctcgataaaaaatgggatcgcgcatacactaacagatctt
gggggtagtcctgagtcacacatacaagccttgatgggaaagctggaagccgcgggtgac
tcatctttgcagaacgccctggaacttgtgcacgagcatctcaaccagatcccatcttat
ggtcatcgcgaggttctgatattgtattcagctctgagcacctctgacccgggagatatc
atggagactattcagaaatgcaagaaatcaagattaagatgttctgttattggactttct
gcagagatgttcatatgcaaacacttgtgtcaagaaactggtgggttgtattccgttgca
gtagatgaggtgcatttgaaggatctgctgcttgagcatgcgcctccacctccggcaata
gcagaatttgcaatttctaatctgatcaaaatgggtttcccacaaagagctgctgagggt
tcaatggcgatatgttcgtgtcataaggaagttaagatcggagctggttacacgtgcccg
agatgcaaagctcgtgtatgtgagctccctacggaatgcaccatctgtggtctgacgctt
gtttcatcgccacatcttgccagatcataccatcatctcttcccaattgctccatttgat
gaggttcctactctgacaagttcgaatgatcctcggagaaaattgggaaagagttgtttt
ggttgccaacagagcctacttggtgcagggaacaaaccggggccatgcgtgacgtgtcgt
aaatgcaagcactatttctgtctggactgcgacatatacatccacgagagcttacacaac
tgtcctggctgcgagagcattcaccgtcctaaatctgtttccttgatggaagaatga
DBGET
integrated database retrieval system
