Raphanus sativus (radish): 130508043
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Entry
130508043 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase NLA-like isoform X1
KO
K16275
E3 ubiquitin-protein ligase BAH [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130508043
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130508043
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130508043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
RING_XB3-XBAT31
zf-RING_UBOX
SPX
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
Phage_int_SAM_5
Motif
Other DBs
NCBI-GeneID:
130508043
NCBI-ProteinID:
XP_056859197
UniProt:
A0A6J0MT68
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All DBs
Position
1:1488813..1490792
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AA seq
327 aa
AA seq
DB search
MKFCKKYEEYMQGQKEKKNLPGVGFKKLKKILKGCRRRDHQIASINHCPRECTVCDGTFF
PELQKEMEDVVGWFNENAQKLLELHLASRFKKCLDWFKGNNNRKRSHLGLIQQGKDLVSY
ALINSVAIRKILKKYDKIHESSQGQAFKTQVQKMHIEILQSPWLCELTAFHINLKESQKD
YSGAVLASPPALFDGCSLVFDDGKPLLSCELSDSVKVDIDLTCSICLDTVFDPISLTCGH
IYCYMCACSAASVNVVDGLKTADPSEKCPLCREICVYKGAVRLDELSILLKRSCREHWEE
RRKTERAERLKQAKEYWDHQCRSFTGI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctgtaaaaagtatgaggagtacatgcaaggacaaaaggagaagaagaatcta
cctggtgttggcttcaagaagctcaaaaaaattctcaagggatgcagaagaagagatcat
cagattgcttcaatcaatcactgtcctcgtgaatgcacagtttgtgatggaaccttcttc
ccggagcttcagaaggagatggaagatgtagtaggatggtttaacgagaatgctcagaag
cttcttgagttacatttagcttctcgtttcaaaaagtgtcttgattggttcaaaggcaac
aacaatcgcaaaaggagtcatctcggtttgatccaacaaggcaaagacttggttagctac
gctctcatcaactcggtcgccatcagaaaaatcctcaaaaaatacgacaagattcatgag
tctagccaaggacaagcgtttaagacacaggtccagaaaatgcatatcgaaatccttcag
tccccatggctctgcgagcttacggcgtttcacatcaacctgaaagagtctcagaaggac
tactctggagctgttttggcttctcctcctgcactgtttgatggttgctctttagtgttt
gacgatggaaagcctttgctttcctgtgagctttctgattctgtcaaagttgacatcgac
ttgacttgttcaatatgcttggacacggtgtttgatccgatatctctgacatgcggtcac
atatattgctacatgtgtgcttgttctgctgcatcagtaaacgtagtcgatggcttgaaa
actgcagacccgtccgaaaaatgcccgctttgccgtgagatatgtgtttataaaggtgct
gttcgcttggatgagctaagtatcttgcttaagcgaagctgccgagagcattgggaagaa
aggcgtaaaacagagagagcagagaggttaaagcaagccaaggagtattgggaccatcaa
tgcagaagcttcactggaatataa
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