Raphanus sativus (radish): 130508187
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Entry
130508187 CDS
T06014
Name
(RefSeq) two-component response regulator ARR10-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130508187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
130508187
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
130508187
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
KaiA_N
LTI65_LTI78_N
Motif
Other DBs
NCBI-GeneID:
130508187
NCBI-ProteinID:
XP_056859485
UniProt:
A0A9W3D6F0
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Position
2:complement(36571704..36575339)
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AA seq
516 aa
AA seq
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MTVEQDIDAMDQFPLGMRVLAVDDDQTCLRILETLLHRCQYHVTTTDKAQTALELLRENK
NKFDLVISDVDMPDMDGFKLVELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLVKPV
RIEELKNIWQHVVRKSKFKKMKSVVTTSGESEGNSDQNGVRANRKRKDQLEEEDEEQDEQ
ERGNEKKARVIWTRELHNKFLAAVDHVGVKNAVPKKILELMNVDNLTRENVGSHLQKFRL
ALKKINNEANQQANMDSHFKQMSSLKGLGSFHHYRPIPLGSSQFHGGAATMRHYPSNRTL
AGMFSSSLPCNHNDGGYMLQGMPLPPLETLHIANNNNNNKAFPSFTSQQSSPLVSPNNHF
VPEGHQGFSPRLEINKRLEDWSSAVLSNNIPQSNLHSKPDALEWNMFGNSTSPNLDTTNQ
TSFCRDTDFGSPNAAQADSFDPLQMKQQHENILSPMTVAQLLRSSSGNERLFMGQQKLEN
GFMASDTGSLDDIVNSMMTQEQSQAEFSEGDWVWVA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggaacaagatattgatgctatggaccagtttccactagggatgagagttctt
gccgttgacgatgaccaaacttgtctccgtattctcgagactttgcttcaccgctgccaa
taccacgtaacaacaacggataaggcacagaccgcactggagttgttgagggagaacaag
aacaagtttgatctcgtgatcagcgatgttgacatgccagacatggatggtttcaagctg
gttgagcttgttggtcttgaaatggacttacctgtcataatgttatctgcgcatagcgat
ccaaaatatgtgatgaaaggagtcaagcacggtgcctgcgactatctcgttaaaccggtt
cgaatcgaggagctcaagaacatatggcaacacgtggtgaggaaaagcaagttcaagaag
atgaagagcgttgtgactactagtggtgaatctgagggaaactctgatcaaaacggggtg
agagcaaacagaaagcgtaaagatcagcttgaagaggaagatgaagaacaagacgaacaa
gaaagagggaatgaaaagaaggctcgtgttatttggacgcgagagctgcacaacaagttc
ctagcagctgttgatcatgtgggcgttaagaacgctgtaccaaagaagattcttgagctg
atgaatgttgacaatctcacaagagagaatgttggaagccaccttcagaaattccggtta
gccttgaagaaaataaacaatgaagccaatcaacaagctaacatggactcacatttcaag
caaatgagttctctcaaaggacttggcagcttccaccactaccgtccaatacctcttgga
tccagtcagttccatggtggagccgcaaccatgaggcattacccttcaaataggaccttg
gcaggaatgttctcatcatcgcttccttgtaaccacaatgatggaggttacatgcttcag
ggaatgccacttcctccactagaaactcttcatatagccaataacaacaacaacaacaag
gcttttccgagctttacttcacaacaaagctctccgctagtttctcccaataatcacttt
gttcctgagggtcaccaggggttttctcctcgcttggagatcaacaaacgtcttgaagac
tggtcaagcgctgtgttgtcaaacaacattccacagagtaatcttcattcaaaaccagat
gccttggaatggaacatgttcggcaactcaaccagcccaaacctggatacaacaaatcag
acgtcattctgcagagacacagattttggatccccaaatgctgcccaagcagactctttt
gatccattacagatgaagcagcagcatgaaaacatcttaagtcctatgacagttgctcaa
ctgttgagaagtagcagtggtaatgaacggttattcatgggacaacagaagctagagaac
ggcttcatggcttcagataccggttccttggatgatatagtcaattccatgatgactcag
gaacagagccaagccgagttctcggaaggagattgggtttgggtggcataa
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