Raphanus sativus (radish): 130508431
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Entry
130508431 CDS
T06014
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130508431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130508431
03016 Transfer RNA biogenesis [BR:
rsz03016
]
130508431
03012 Translation factors [BR:
rsz03012
]
130508431
04131 Membrane trafficking [BR:
rsz04131
]
130508431
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
130508431
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130508431
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130508431
Translation factors [BR:
rsz03012
]
Eukaryotic type
Elongation factors
130508431
Membrane trafficking [BR:
rsz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
130508431
Exosome [BR:
rsz04147
]
Exosomal proteins
Proteins found in most exosomes
130508431
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FcpA
AAA_22
Motif
Other DBs
NCBI-GeneID:
130508431
NCBI-ProteinID:
XP_056859931
UniProt:
A0A6J0JXJ5
LinkDB
All DBs
Position
2:40655296..40657488
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGMLKPGMVVTFAPSGLTTEVKSVEMHHESLVEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAVKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagttccacatcaacatcgtggtcatcggccatgtcgactctggaaaa
tcgaccaccactggtcacttgatctacaagctcggtggtatcgacaagcgtgtgatcgag
aggttcgagaaggaggctgctgagatgaacaagaggtctttcaagtacgcgtgggtgttg
gacaaacttaaggccgagcgtgagcgtggtatcaccattgatatcgctctctggaagttc
gagaccaccaagtactactgcacggtcattgacgctccaggacatcgtgatttcatcaag
aacatgattactggtacctcccaggctgattgtgctgttcttatcattgactccaccacc
ggtggttttgaggctggtatctccaaggatggtcagacccgtgagcatgctcttcttgct
ttcacccttggtgtcaagcagatgatttgctgctgtaacaagatggatgctactacccct
aagtactccaaggctaggtacgatgagatcatcaaggaggtgtcttcctacttgaagaag
gttgggtacaaccctgacaaaatcccattcgtccccatctctgggttcgagggtgacaac
atgattgagagatccaccaaccttgactggtacaagggaccaactctactcgaggctctt
gaccagatcaacgagccaaagaggccctcagacaagcccctccgtctgccacttcaggat
gtttacaagatcggtggtattggaacggtgccagtgggacgtgttgagaccggtatgctc
aagcccggtatggttgtcaccttcgctccttcagggttgaccactgaggttaagtccgtt
gagatgcaccacgagtctcttgtggaggctcttccaggtgacaacgttggattcaatgtc
aagaatgttgctgtgaaggatcttaagcgtgggtatgttgcatccaactccaaggatgac
cctgccaagggtgctgccaacttcacctcccaggtcatcatcatgaaccaccctggtcag
atcggtaacggttacgctccggttcttgattgccacacatcccacattgcagtcaagttc
tctgagatcctcaccaagattgacaggcgatctggtaaggagatcgagaaggagcccaag
ttcttgaagaatggtgatgctggtatggttaagatgactccaaccaagcccatggttgtc
gagactttctccgagtacccaccattgggtcgtttcgctgttagggacatgaggcagacg
gtggctgttggtgttatcaagagcgtcgacaagaaggacccaaccggtgctaaggtcacc
aaggccgcagtcaagaagggagctaaatga
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