Raphanus sativus (radish): 130509117
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Entry
130509117 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130509117
KO
K14794
ribosomal RNA-processing protein 12
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
130509117
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
Other 90S particles
130509117
Pre-60S particles
Other pre-60S particles
130509117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
MMS19_N
INTS7_N
Mo25
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
130509117
NCBI-ProteinID:
XP_056860749
UniProt:
A0A9W3DAH9
LinkDB
All DBs
Position
3:complement(17999092..18005636)
Genome browser
AA seq
1269 aa
AA seq
DB search
MEDIETNMCLTPSEDFGQFMLSRLSQSKRPDHKHLCAVIEELSKTLTESNHSRTPVAYFA
ATCSSLNSLLSADGEPSLDVVQPHVVILSLVFPKVSPGVLKRNGLALRLVLTVLRLRSAT
PECLVSALKCLVHLLTTVESTMGSEVSESYSILLSFVTHSDGKVRKLASSCLRDVLVKSS
GTKAWQSLSGTIAELFQKYLDLAHKSEVRPAEGAKGAQQVLYILSALKECLALMSRKHIA
TVIDGFKILLITRDAFIARPVIDSLNALCLNPTSEVPVEALVEVLYQAAVLFSAPETSAD
AMTSTARLLKVGMMRAFSLNRDVCVVKLPSVFNGLKDIIASEHEEAIFAATDALKSLINS
CVDESLIRESLNGIRNSNLDARKSSPTIIEKLCATVESLLDYKYHAVWDMAFQVVSTMFD
KLGEDSSYFMRKTLEDLSDMKDLPDEDFPYTKQLHECVGSALGAMGPETFLNVVRLNLEA
SDLTEVNVWLFPILKQYTVGGRLSFFTEYISRMIETMSQKAQQLKLQGLTAASRSVDSLS
YSLWALLPSFCNYPVDTAESFQDLGRILCGALQSQAEPRGVICTSLNILIQQNKVVAEGK
EVPVNDASPAMLRASGRYNSDIAAANLKVLRSCAPKLLDVLSKIFHESGKDDGGSLQSAI
GNLASIAEKKTVSKLLFKTLRELLEATKTAIAQDESSNSGMDVDNTEDKNSSANLRARLF
DLLVSLLPGLGGQEVDTIFSSLKPAMQDPKSQIQKKAYKVLSVILKSSDGFVSKHLEELL
ELMHNICHVSAKRHKLDCLYFLLAHASRTDDLKARKDIVSSFLPEVILALKEVNKKTRSR
AYDVLVQIGHAYADEENGGDNEKLHGYFNMVVGCLAGEKPQMISAAVKGVARLTYEFSDL
IASAYNLLPSTFLLLQRKNKEITKANLGLLKVLVAKSPVEGLHANLKSMVEGLLKWPEGT
KNLFKAKVRLLLEMLIKKCGTEAVKSVMPEEHMKLLTNIRKVKERKERKYAAASEMSRSQ
HSKETSSKASRWNDTKIFSDFDDEDEDSDGDYMDGETHGRSKASSLLKSKASALRSKKSH
RQSHLEVNESDDEPLDLMDRYKTRSALRSSELRKRKADSDEEAEFDEEGRLIIHEGGRGK
RKEISDPDSDAKSSKGSRFSANTSKKNQKRMKTSESGYAYTGKEYASKKASGDLKRKDKL
EPYAYWPLDRKMMSRRPDQRAVAVRGMSSVVKLTKRLEGKSTAEALAATKFKKFKRSGQK
KSAGKKKSK
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatcgaaaccaacatgtgcctcacaccctcagaagactttggccagttcatg
ctctctcgcttatctcagtcaaaacgaccagaccataaacacctctgcgctgtaatcgag
gagctctcaaagactctgacagaaagtaatcacagtcggacacctgtggcttacttcgcc
gccacgtgcagctctctaaacagcctcttgtctgctgatggtgagccatctctggatgtc
gtccagccgcatgttgtcatcctctccctcgtgttccctaaagtctcacccggagtgctg
aagaggaatggcttggctctgcgtctcgtcctcaccgttctgcgtctgagatcagccacg
cctgagtgcttggtctcggcgttgaagtgtttggttcatctcctcactaccgttgagtcc
acgatggggagtgaagtctccgaatcatacagcattttgctgagtttcgttactcactca
gatgggaaggtaaggaagctagcgagctcctgtctccgtgacgtcctggtgaagtcctct
ggtacaaaggcatggcaatcactcagtggaactatcgcagagctgttccaaaaatatttg
gacctcgcacataagtctgaagtgcgtcctgcggaaggagccaagggggcgcagcaagtg
ctctacattctcagcgctttaaaagagtgcttggcgttgatgtccagaaagcatattgct
actgtgatcgatgggtttaagatactgctcattacgcgcgatgcgttcattgcgaggccg
gtgattgactctttgaatgcgctctgtctcaatccaacctctgaggttccggttgaggcg
ctggtcgaagtgttgtatcaggctgctgttctgttctcggcgcctgaaacgtctgctgat
gctatgacctctacagcacgtttgctgaaagttgggatgatgagggctttttcccttaac
agagatgtctgcgtggttaaacttcctagtgtgttcaatggtctgaaagatattattgca
tctgaacacgaggaggcaatctttgcagcaacagatgcattgaagagtttgataaactcg
tgcgtcgatgagagtttgatcagagaaagcctcaacgggatccggaattcaaacttggat
gcaaggaagtctagtccaacaatcatcgaaaaactgtgtgcaacagttgaaagcttgctt
gattacaagtaccatgcagtctgggacatggcttttcaagtagtttcgaccatgttcgat
aaattaggtgaagattcttcatattttatgaggaagaccctcgaggacttatcagatatg
aaagatttacccgatgaagacttcccttatacgaagcagttgcatgagtgtgtaggatca
gcccttggtgcaatgggacctgaaacatttttaaacgttgtgcgtttaaacctggaggcg
agtgatctgactgaggtaaacgtttggctcttcccaatcctgaagcagtatacagtgggg
ggacggctaagtttcttcactgagtacatctctagaatgatcgaaacaatgagccagaaa
gctcaacagctcaagctacaaggtcttactgcagcatctaggagcgtggactctctctcg
tattcattatgggctttgttaccttcattttgcaactatcctgtggatactgctgagagt
tttcaggatctggggagaatattgtgtggagctcttcaatcacaggctgaaccccgtgga
gttatatgcaccagtttgaatatcctaattcaacagaataaggtagttgcggagggtaaa
gaagtgcctgtgaatgatgctagtcctgctatgttacgagctagtggtcgttataattca
gacattgcggcagctaatttgaaagttctgcggtcgtgtgctcctaagttattggatgtt
ctatcaaagatatttcatgaatctggcaaagatgatggcggttctcttcagtctgcgata
ggtaacttggcttccattgcggagaaaaagactgtttcaaagctacttttcaagacactg
cgagagcttttagaggctacgaaaactgctattgcgcaagatgaaagttctaacagtggg
atggacgtggataacaccgaagacaaaaattcttctgccaaccttagggcgaggttgttt
gatctgctagtttctctcttacctggtttgggtggtcaagaagtagataccatattcagt
tctctgaagcctgcaatgcaggatcccaagagccaaattcaaaagaaagcgtacaaagtt
ctttcagttatcttgaagagttccgatggatttgtttcaaaacaccttgaggagttgctt
gaactgatgcacaatatatgccatgtctctgccaagcgccataaacttgattgtttatac
ttcctgttagctcatgcttcaaggactgatgatttaaaggcgagaaaagacattgtttct
tcatttcttcccgaagttatacttgctctaaaagaggtaaataaaaaaacaagaagcaga
gcctatgacgtacttgttcagattgggcatgcatatgcagatgaggaaaacggtggagac
aatgagaaattacatggttacttcaatatggtggttggttgcttggctggagaaaaacct
cagatgattagtgctgctgttaagggagtagctcgtttgacatatgagttctccgatctc
atagctagtgcttacaatttgctcccttcaacatttcttctcctccagaggaaaaataag
gaaatcacaaaagcaaatttaggtttgttgaaggtgttggtggctaagtcacccgttgaa
ggactacacgcaaacttaaagagcatggtcgaaggcttactgaaatggccagaaggaacc
aaaaaccttttcaaagcaaaggtgaggcttctattggagatgctaatcaagaaatgtggc
acagaagctgttaagtctgtgatgcctgaagaacatatgaaactcctgacaaacatcaga
aaggtcaaggaacgtaaagagagaaaatatgcagctgcctctgagatgagtagatctcag
cattcaaaggaaacgtcatcaaaggccagccgttggaacgataccaaaatattttctgat
tttgatgatgaagacgaggacagcgatggagactacatggatggggagacgcatggccgt
agcaaggcttcctctttgttgaaatctaaagcatccgctttgagatcaaagaaaagtcat
aggcagtctcatcttgaagttaatgagtcagatgatgagccgcttgacttaatggatcga
tacaaaacaagatcagctcttcggtcaagtgagcttcgcaaacgaaaagctgactcggat
gaagaagcagagttcgatgaggaaggacggctaatcatccatgaaggagggagaggtaaa
aggaaggagatctctgatccagattctgatgcaaagagcagcaaaggtagccgtttctct
gcaaacacatctaagaagaaccaaaagcggatgaagacatcagagtcaggatacgcttac
acaggtaaagagtatgcaagcaaaaaggcaagtggggatcttaagaggaaagataagctt
gagccgtatgcgtattggccacttgatcgcaagatgatgagccgtagaccagatcagagg
gcggttgcggtcagaggtatgtctagtgtggttaagctgacgaagaggttggaaggcaag
agcactgcggaagcacttgccgccactaagttcaaaaagttcaagaggagtggtcagaag
aaatcagctgggaagaagaaaagcaagtga
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integrated database retrieval system
