Raphanus sativus (radish): 130509137
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Entry
130509137 CDS
T06014
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130509137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130509137
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130509137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
OB_RNB
Motif
Other DBs
NCBI-GeneID:
130509137
NCBI-ProteinID:
XP_056860777
UniProt:
A0A9W3DAL4
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All DBs
Position
3:complement(18580293..18582219)
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AA seq
404 aa
AA seq
DB search
MESDQGKLFIGGISWDTDENLLREYFSNYGEVLKVTVMREKATGRPRGFGFVAFSDPAVI
DRVLQEKHHIDNRDVDVKRAMSREEQSPAGRPGSFNASRSFDSGVKTKKIFVGGLPPALT
SDEFRAYFETYGPVSDAVIMIDQATQRPRGFGFVSFDSEDSVDLVLHKTFHDMSGKQVEV
KRALPKDANPGVAGGGGGRGGGGSGGFPGYGGSGYEGRVDSSSRYMPPPQNTGSGYPPYG
ASGYGTGYGYGSNGVGYGGFGGYGNPAGAPYGNPGVPGAGFGSGPRSSWGGQAPSGYGNV
GYGNAAAPWGGSGPGSAVMGQGGGPSAGYGSSQGYGYGGNDASYGVPSGYGAVGGRPGSM
PNSHGGGYADASDGSGGYGNQNHLGNGQAGYGGGYGNGRQAQQQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatcagggtaagctgtttatcggcgggatttcatgggacaccgacgagaat
ctcctgagagagtacttctccaattacggcgaggttttgaaagtgacggtcatgcgcgag
aaagccacgggccgtcctcgaggattcggattcgtcgcgttctccgatcccgccgtcatt
gatagggttcttcaggagaagcatcacatcgataatagagatgttgatgtgaagagagca
atgtctagagaagagcagagtcctgctgggagaccagggagttttaatgcttctaggagt
tttgatagcggtgttaagaccaagaagatattcgtggggggtttgcctcccgctttaaca
tcagacgagtttcgggcctacttcgagacttacggccctgtgagcgatgcggtcattatg
attgaccaggcgacgcagcgtcctagagggtttgggtttgtttcgttcgactctgaagat
tcggttgaccttgttttgcacaagactttccacgatatgagtggtaaacaagtagaagtc
aaaagagctcttcctaaagatgctaaccctggagtagccgggggtggtggtggtcgcggt
ggtggtggctctggaggtttcccgggttatggtggaagtggatatgagggtcgtgttgat
tcgagtagtagatacatgccgccgcctcagaacactggaagtggttatcctccttatggt
gcttctggttatggtactggttatggttatggcagcaacggtgtaggttacggcggtttt
ggagggtatgggaatccggctggggcgccgtatgggaatcctggtgtccctggagctggg
tttggaagtggtccaagaagttcatggggaggccaagctccatccggttacggtaatgtg
ggatatggaaatgctgctgctccttggggcggttctggtcccggttcagcagtgatgggt
caaggaggtggtccgtctgcaggttatggaagtagtcaagggtatggctatggtggaaat
gatgcttcttatggggttccatctggttacggtgcagttggtggacggcctggaagtatg
cctaacagccatggaggtggctatgctgatgcttcagatggttctggaggctatgggaac
cagaatcacctagggaacgggcaagctggttatggtggaggttatggaaacggtaggcaa
gctcaacaacagtga
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