Raphanus sativus (radish): 130509195
Help
Entry
130509195 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130509195
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130509195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
130509195
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130509195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
130509195
NCBI-ProteinID:
XP_056860905
UniProt:
A0A6J0MLE5
LinkDB
All DBs
Position
3:20145865..20147622
Genome browser
AA seq
369 aa
AA seq
DB search
MREKRGRRDPNPKTLDPVGDDDDESRLVTRKEGKGFFACYILTSLSPRHKGHTYIGFTVN
PKRRIRQHNGEIRSGAYRTKKKRPWEMVLCIYGFPTNISALQFEWAWQHPRESRAVREAA
AAFKSFSGLARNIKLAYTMLTLPAWNSLNLTVNYFSSKYAHHGGLSPSLPPHMKVQVCAM
DYLPCFTKGDNNSQSDGEDSLDGNEEEGDDHSNQIQPRNPTTSSLDDLHQGRKDLHGQHF
EKAKEPEGILDDRLANFSGFELLDDSDDDEVSRSSSVGSLGAVEKELETDRLATFSGFGF
EEIVEDETSHNTTMGKDGGRRSNLIRSTTEVEVIDLMTPSPSCRVGSSMKRPRASEFIDL
TRSPCFIEL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaaaaggggcagaagagatccaaatccgaaaaccctagatcccgtcggtgac
gatgatgatgagtcgcgtctcgtcacccgaaaagaaggaaaaggcttcttcgcctgctac
atattgacctctcttagccctcgtcacaagggtcacacctatatcgggttcacggttaac
ccaaagcggagaataaggcagcacaatggagagattaggagtggtgcatatagaacaaag
aagaaacgtccttgggagatggtcctctgtatctatggtttccctaccaacatctctgcc
cttcagtttgagtgggcttggcaacacccgagagaatctcgtgcagtgagagaagctgct
gctgcttttaaatccttctctggacttgcacgcaatatcaagcttgcttacacaatgcta
actcttccagcttggaatagcttaaacctgacagtcaactatttctcatcaaagtatgca
caccacggcggtctttctccaagtttgcctcctcacatgaaagtccaagtctgtgctatg
gattatcttccatgtttcactaaaggagacaacaattctcaatccgatggtgaagatagt
cttgatggtaatgaagaagagggtgatgatcatagcaaccaaatccagcctaggaatcca
actacaagctcattggatgacttgcatcagggtagaaaagatcttcatggtcaacatttt
gagaaagcgaaagaacccgagggtatacttgatgacagattagcaaatttctctggtttt
gagttattagatgacagtgatgatgatgaagtatcacgtagtagcagtgtaggatccctt
ggagctgtggagaaagaacttgagactgacagattagcaactttcagtggttttggcttt
gaagagattgttgaagatgaaacatcacacaacaccactatggggaaagatggtgggaga
agaagcaaccttatcagatcaaccactgaagttgaagtgatagatctgatgactccctca
ccgagctgcagagttggatcctctatgaagaggccaagagcttctgagtttatagatttg
acaaggtctccttgtttcatagagttgtaa
DBGET
integrated database retrieval system
