Raphanus sativus (radish): 130509235
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Entry
130509235 CDS
T06014
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
130509235
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130509235
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
130509235
NCBI-ProteinID:
XP_056860962
UniProt:
A0A6J0MK91
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All DBs
Position
3:complement(21304447..21307505)
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AA seq
422 aa
AA seq
DB search
MSSVSSQQQFRYTQTPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANKNQAFI
EFEDLNQAIQMISFYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVVGNVLLVTVEGE
DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATSARTSLDGRNIPSYL
LPEEVSPCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVVVGVDGRKME
PESNVLLASIENMQYAVTLDVLHTVFVAFGAVQKIAMFDKNGGVQALIQYPDVQTAVVAK
GALEGHCIYEGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPDPAVAMAPQPGHNPYPSNS
PQYQGADASHYQQQQPQGGWGQQSGGQGHNPYMGGPPSMHQGGPGGYMPPHHYGSGPSGP
MH
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtatcaagccagcaacagttccgttacacgcagactccttcaaaggttctt
catttgagaaacttaccgtgggaatgcacggaagaggagttgatcgagctcgggaagccc
tttggcactgttgtgaatacaaagtgtaatgttggagctaataaaaatcaagctttcatt
gagttcgaagatttgaaccaagctattcagatgatctcgttctacgcgtcttcgtcagag
cctgctcaggttcgaggcaaaactgtgtacctacagtactccaacaggcaggagatcgtg
aacaacaagacggcggcggatgttgtggggaatgttcttctcgttacagtggaaggggag
gatgctcgcatggtcagcattgatgttttgcatctggtattctcagcctttggtttcgtc
cacaagattactactttcgagaaaacagctggatatcaggcacttgttcaatttactgac
gctgaaactgcaacctctgcaagaacttccctcgatggaagaaacatccctagttatcta
ctccctgaggaagtcagcccatgctctcttaaaatcacatattcagctcatacagatttg
actgtcaaattccagagccatcggagcagggactatactaatccttaccttcctgttgct
ccttcagccattgatagtactggtcaggtggttgtgggtgtagacgggaggaagatggag
cctgaaagtaatgttcttcttgcatccatcgagaacatgcagtatgcagtaaccttggat
gttctacacacagtttttgtggcatttggagcagttcaaaagattgcaatgtttgacaag
aatggtggggtacaggcattgattcaatacccagatgttcaaacagctgtggtggcgaaa
ggagcattggaaggacactgtatttatgagggtgggttctgtaagctacacatcacatac
tcacgccacaccgacctcagcataaaggtgaacaacgatagaagcagagactacacaatg
cctgacccggctgttgcgatggctccacagcccgggcataatccatacccgagtaattca
ccgcagtaccagggagcagatgcgagccattaccagcagcagcagccacaagggggatgg
gggcagcaatcaggagggcaaggtcacaatccctacatgggaggaccaccgtcgatgcat
caaggtggtccgggtggttatatgccgccacaccattacggtagtggcccttctggtcca
atgcattag
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