Raphanus sativus (radish): 130509286
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Entry
130509286 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
130509286
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130509286
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130509286
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130509286
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130509286
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
DUF7351
Motif
Other DBs
NCBI-GeneID:
130509286
NCBI-ProteinID:
XP_056861058
UniProt:
A0A9W3DBF8
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All DBs
Position
3:complement(22964623..22968364)
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AA seq
804 aa
AA seq
DB search
MEEAASNNRSSAVSSSSASAVFRRIEFHPARKPWNGFSNKGGSDFKLETLNPSFSSANKL
ALSSSSSVKKQDGSDSLDRALTFSITIRKIGAGLENLGNTCFLNSVLQCLTYTEPLAAYL
LNVGHEKRCHVAGFCALCAMQKHVRSALQATGDTLAPKYLVSNLRCVSRNFRNGRQEDAH
EYMINLLECMHKCSLPSGVPSESSDAYRSSLVHKIFGGTLRSRVQCAQCSHCSDKFDPFL
DLSLDISKADSLQRALTRFTSVELLDDGAKVYQCERCKQKVKATKQLTVSKAPYVLALHL
KRFEAHSSDKIDRKVEFPSAVDLKPFFSGPNEGDLKYTLNSVLVHYGRSIHSGHYSSFVR
TSTSGMWYSLDDNKVSQVSEKIVFNQKAYMLFYVRDRQNTAPKNAPAMVKKESLSTNRAP
MVISSNRNDRVSGSTVMKASSFNGLNTNGTTPLRSCNQGAQKDPTSSAKEILERKNGKAP
LRSCNQGAQKVLPLSQANGEGSLVKENIKAASATLPGKVSPLLDGSSKAQILVNLPTSVA
KAEETLTTPRKTRKGKTKTTLQVGLRLFKLALGVRKKKKQKKGRSSSLAGKVISEELLSE
KRAEDQERSTSEITSEVASGSSCLPGKSVHNERKMNSNGNMLLGSATTGDLKESADNQNG
AVLASDQQPPLRSSGLSKASQIAKRKRESSSKDEQIVLQKDEPTILTRGLPEILTRGLPE
TVVGKWDEEVSASKKMGMSEGTKIGYVADEWDEEYDRGKKKKIRIKEEMYAGPNPFQAFA
SKKQTDTKKKWTQRMNTAKTGFRK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcagcgagtaataatagatcctccgccgtttcgtcctcttcagcttcagcc
gtcttcagaaggatcgagtttcatcccgcgaggaaaccctggaacggcttctctaacaaa
ggtggttccgatttcaagttggagactttgaatcccagcttctcttctgccaacaagcta
gctctctcttcatcctcctccgttaagaagcaagacgggtccgattcgctcgatcgggcg
cttacctttagcataaccatccgtaaaatcggtgcgggtttggagaatctcgggaataca
tgttttcttaactcggtattacagtgtttgacatacactgagcccttagctgcttaccta
ctaaatgttggccatgagaaacgctgccacgtggctgggttttgtgctttatgtgcaatg
cagaagcatgtgaggagtgctctccaagctactggcgacacattagccccaaaatatttg
gtctcaaacctgcgatgcgtatcgagaaacttcaggaatggtcggcaggaagatgcacat
gagtacatgatcaatttgctagaatgcatgcacaagtgttctctgccttctggtgtgcca
agtgagtcctctgatgcttacaggagcagcttggttcacaaaatattcggtggtaccctc
cgtagtcgggtgcaatgcgcgcaatgttcacattgctccgacaagtttgatccgtttctt
gacctaagcctagacatttccaaggcagattcgttgcagagagcgctcacacgtttcact
tctgttgagctcttagatgacggtgcaaaggtttaccaatgtgaaagatgcaagcagaaa
gttaaggctacaaaacagctgactgtttctaaagcaccgtacgttctagctctgcatctc
aagcggtttgaagcacatagttccgataaaatcgaccggaaagtcgagtttccctctgca
gttgacttgaaaccttttttcagtggtccgaatgaaggtgacttgaagtacactctgaat
agtgttttagttcattatggtcgaagtattcattctggtcactattcatcctttgttcgc
acttcaactagtggcatgtggtattcccttgatgacaacaaggtttcccaagttagtgag
aagattgtgttcaatcagaaggcgtatatgctcttctatgtccgtgatagacaaaacacg
gccccaaagaatgcgcctgccatggttaagaaagagagtctttccacaaacagagctcct
atggttatatcttctaacagaaatgatcgagtgagtggttcaacagtcatgaaagcatct
agttttaacggtcttaataccaatggcacaacacccctgagatcatgtaatcaaggtgct
cagaaggatcccacaagcagtgcaaaagagatacttgagaggaaaaatggtaaagcacct
ttgagatcatgtaatcaaggtgctcagaaggtgctgccactatcacaggctaatggggaa
ggatcattggtaaaggagaatataaaggctgcaagcgcaacgctaccagggaaggtttcc
cctctactggatggcagcagcaaggctcaaattcttgtgaacttgccgacttctgtagct
aaagccgaggagactctcaccacaccaagaaagactcgcaagggtaaaacaaaaacgacc
ctgcaagtgggattaagactttttaagctggcccttggcgtacgcaaaaagaagaaacag
aagaagggaagatcaagtagcttagctggtaaggttatttctgaggagcttctatccgag
aaaagagctgaagatcaagagcgttccacgtcagagataactagcgaagttgcttccggc
tcttcttgcttgcctggaaagagtgtccataatgaaaggaaaatgaacagtaatgggaat
atgttgcttggctcagcgacgactggagatctcaaggagagtgctgataatcaaaatggt
gccgttcttgcttcagaccaacaaccaccgttgaggagttctggcttatctaaagcaagc
caaatcgccaaaagaaagagagagtcgtcgtcaaaagatgaacaaatcgtgttgcagaaa
gatgagccgacgattctcacccggggtttgccagagattctcacccggggtttgccagag
acagttgttggcaaatgggatgaagaagtctcggcttctaagaagatgggaatgagtgaa
ggcactaaaatcggttatgtagcagatgagtgggatgaggagtatgatagagggaagaaa
aagaagataaggatcaaagaggagatgtatgcaggaccgaacccgttccaggcgtttgca
tcaaagaaacagacagacacaaagaagaaatggacgcaacgcatgaacaccgcaaagaca
ggtttccggaaatga
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