KEGG   Raphanus sativus (radish): 130509418
Entry
130509418         CDS       T06014                                 
Name
(RefSeq) cullin-like protein 5
  KO
K10609  cullin 4
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03420  Nucleotide excision repair
rsz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130509418
  09124 Replication and repair
   03420 Nucleotide excision repair
    130509418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    130509418
   03400 DNA repair and recombination proteins [BR:rsz03400]
    130509418
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    130509418
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     130509418
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      130509418
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      130509418
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   130509418
SSDB
Motif
Pfam: Cullin
Other DBs
NCBI-GeneID: 130509418
NCBI-ProteinID: XP_056861317
UniProt: A0A9W3DC63
LinkDB
Position
3:25095875..25098148
AA seq 503 aa
MLESQMISPDAGSVVGRISVLSQSVIKRLPMKRSISEGDLSSSSKKKKRKTKHHESEDLG
SDLAPPPIRCSISDGDIITRKETDTDDDAEYPIDDVNLASAMVNPPYSISDDEDDDPPNI
STPAVRVFNLNFCHNKPDPKVYVDEAWILLKPALTSILHEEDDLDRFSFATINHAAAKTW
WNESSGEAFSNLILEVCGTYISTTLQSLAVHCNDDDDPSRLLLLLEKSWLDFPKKLEHIC
SIVGVGGKKLWGLGLKLLPTKLFLVPQICDKVRTIILHLITDQRLGKPVNMSQLKNLMDM
FSGDPFRKLRFLEKPFLDSTAEFYAAEAKQVLEQSSDISLYLKHINRRVGEEKKKCRSLS
LFFIFQDELLEVVYRELLGVHACAILEKGFEKLMDDRHFEALRIMYDLFSQADLVHHIND
ALSSYICQTGEKILEEEGSSLAEFKARVDKVCCTYFSEDPLLEKTAQKSFEGLGMSVVPP
MLDGPFAEEMLESGPLPTSHRCF
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgctagaatcccagatgatatcgccagacgctggatctgttgttggtaggatctccgtg
ctttcacaatcggtaatcaagaggctgccaatgaaacgctcaatcagtgagggcgatttg
tcctcctcgtcgaagaagaagaagaggaagacgaagcaccatgaatctgaagatctcggg
tccgatttggctccaccacccatcagatgctcaatcagcgatggggatatcatcacgagg
aaggagacggacacagacgatgacgctgaatatccaatcgatgatgttaatttggcatcg
gctatggtgaatccaccatactcaattagtgacgatgaggacgacgatcctccgaatatc
tccacccctgctgtgcgagttttcaatctcaacttctgccataataaacctgaccccaaa
gtctacgtggacgaggcttggatacttctaaagccagctctcacaagcatcttacatgaa
gaagacgacctagaccgtttcagcttcgctacgattaaccatgctgctgctaagacatgg
tggaatgagtcatcaggagaagccttttccaacctgattctagaggtctgtgggacatat
atttccacaaccctgcagtctttggcagtgcattgcaatgatgatgatgatccctctcgt
ctcttgcttctcttggagaaatcttggctggattttcctaagaaattagagcatatctgt
agcattgttggagttggtggaaaaaaattgtggggtttgggtcttaagcttttacccaca
aagctcttcttggtccctcaaatttgtgacaaggttcgaaccatcattctgcatctcatt
acagatcaaagattaggcaagcctgttaacatgagtcagctaaagaatcttatggatatg
tttagtggggatcctttccgcaaattgcgcttcttggagaagccttttcttgactccact
gctgagttttatgccgcagaagcaaaacaagtcctggaacagtcttctgacatttccctg
tatttgaaacatatcaatcgaagggttggtgaggagaagaaaaaatgcagaagcctctcc
cttttctttatattccaggatgagctgcttgaagttgtctacagggaactcctgggggtt
catgcttgtgccattcttgaaaagggtttcgagaagctaatggatgatagacactttgag
gcccttcgtatcatgtatgatctcttctcccaggcggatttagtgcatcatatcaacgat
gcccttagctcttatatttgtcaaactggagagaagattctagaagaagaaggctcgtct
ctggctgagttcaaggctcgcgttgataaggtatgttgtacatacttttccgaagatccg
ttgttggagaagactgcccaaaagtcttttgaaggacttggaatgtctgtcgttcctcct
atgctggatggtccattcgccgaggaaatgttagagtccgggcctcttccgacaagtcac
cgctgtttttaa

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