Raphanus sativus (radish): 130509835
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Entry
130509835 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130509835
04131 Membrane trafficking [BR:
rsz04131
]
130509835
04121 Ubiquitin system [BR:
rsz04121
]
130509835
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130509835
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
130509835
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130509835
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130509835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
130509835
NCBI-ProteinID:
XP_056862059
UniProt:
A0A9W3DE14
LinkDB
All DBs
Position
3:1629603..1631001
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AA seq
221 aa
AA seq
DB search
MMEGIFICAAPHCLRSFLKKPDFESHVHHLHASLLLPDAPLDKEGGNDSDLQTTKHQSSA
SSDSTLMRGPLRSHQQQQPPPLLHRSPSLSKPLSRFGSYPADNNDNSRPPGFETASPKPG
IRFPDYPLPMNMMQPPPTMPIPNNRLPQQFSFPPYPTTDGSSQQFYNGAPFEMTRPEDIT
RLCARVSAGAAAACANDESEFPRILSSSVLVESWYGTASTG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggtatcttcatttgtgctgctcctcactgtctcaggtctttcctcaagaaa
cctgactttgaatcccatgtccatcacctccacgcctcccttttactacccgatgctcct
cttgataaagaaggtggcaacgactctgaccttcagaccacaaagcaccaatcttctgct
tcttctgactccacactcatgagaggtcccttaagatcccaccagcagcagcagcctcct
ccgttactacacaggtcaccttccttgtcaaagccactctctcgatttgggagttaccct
gcagataacaacgataactctcgtcctcccggtttcgaaaccgctagtcctaaacctgga
atccggttccctgactaccctctgcctatgaatatgatgcaaccaccgcccaccatgccc
attcccaacaatcgtttgcctcagcagtttagctttccgccttatccaacaactgatgga
tcgtctcagcaattctacaatggtgcaccttttgagatgacaagacctgaagacataaca
aggttatgtgctcgggtatcagcaggagcagcagcagcctgcgccaacgatgaatctgag
tttccaaggatcttatcatcctcagtcctcgtggaatcctggtatggaaccgcctcaaca
ggttaa
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