Raphanus sativus (radish): 130510432
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Entry
130510432 CDS
T06014
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130510432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130510432
03036 Chromosome and associated proteins [BR:
rsz03036
]
130510432
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
130510432
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
130510432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Ge1_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
RMC1_N
Beta-prop_RIG_1st
Beta-prop_SPT8
Pep3_Vps18
WDR54
CFAP43_N
YajC
Motif
Other DBs
NCBI-GeneID:
130510432
NCBI-ProteinID:
XP_056862713
UniProt:
A0A9W3DH08
LinkDB
All DBs
Position
4:2725563..2727279
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AA seq
415 aa
AA seq
DB search
MDFDYAHFALTEGNKGKDQTDQVSSPSREAYRKQLAETMNLNHTRILAFRNKPQAPLDLL
PTDHSASSLHHQPKSVKPRRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALGHTV
YLWDASTGSTSELVTVDEEKGLVTSINWAPDGRHVAVGLNNSEVQLWDSGSNRQLRTLKG
CHQSRVGSLAWNNHILTTGGMDGQIVSNDVRIRSHIVETYSGHTQEVCGLKWSGSGQQLA
SGGNDNVVHVWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIK
FWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHT
SRVLYMAQSPDGCTVASAAGDETLRFWNVFGAPETAKKAAPKAVHEPFSHVNRIR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggactttgactacgctcacttcgccctaaccgaaggaaacaaaggtaaagaccagaca
gatcaggtaagctcaccatccagagaggcctacaggaagcaactcgctgagacgatgaac
ctgaaccacacacggatcctcgccttcaggaacaaacctcaagctcctctggacttgctt
cccaccgaccactctgcttcttctcttcaccaccaacccaaatccgttaagccaagaaga
tacattcctcagacttctgagaggacgttggacgcacctgacattgttgacgacttctac
ctcaacttgcttgactggggcagtgctaatgtcttggccattgcgttgggacacactgtt
tatctctgggatgcttccactggctccacgtctgagcttgtcaccgttgatgaggagaaa
ggactggtcacgagcatcaactgggcgcctgatggtcgtcatgttgcagttggactcaac
aactccgaagtccagctttgggattctggatccaaccgtcaactgaggacattgaaaggt
tgccaccagtctagagtaggatcactggcgtggaacaaccacatcctcacaacgggtggg
atggacggacagatcgttagcaacgacgtgcgcatcagatcacatatcgtggagacttac
agtggacacactcaagaggtttgtggcctcaagtggtcaggatccgggcagcagctagcg
agcggtggcaacgacaatgttgtgcacgtatgggatcgttccgtggcctcctcgaactcg
accacgcagtggcttcacaggcttgaggaacatacctctgctgtgaaggctcttgcgtgg
tgccctttccaggcgaatttgctagcgaccggtggtggtggaggggacaggacgattaag
ttctggaacactcacacgggggcttgcttgaactcggtggacactggctcccaagtttgt
tctttgctgtggagtaagaatgagagagagttgcttagctcgcatgggtttactcagaac
cagcttacgttgtggaagtacccgtctatggtgaagatggctgagctcactggtcataca
tcaagagttctgtacatggcccagagtccagatggttgtacagtagcttcagcagcagga
gacgagacactgagattctggaatgtgtttggagcaccagagacggccaagaaagcagct
ccaaaagcagtccatgagccattctctcatgtgaaccgtattcgttga
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