Raphanus sativus (radish): 130510578
Help
Entry
130510578 CDS
T06014
Name
(RefSeq) bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like
KO
K12451
3,5-epimerase/4-reductase [EC:5.1.3.- 1.1.1.-]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00541
Biosynthesis of various nucleotide sugars
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01250
Biosynthesis of nucleotide sugars
Module
rsz_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
130510578
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
130510578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
DUF7381
Motif
Other DBs
NCBI-GeneID:
130510578
NCBI-ProteinID:
XP_056863009
UniProt:
A0A9W3DGS7
LinkDB
All DBs
Position
1:complement(5557207..5558505)
Genome browser
AA seq
300 aa
AA seq
DB search
MGTEANGSSSSLNFLIYGRTGWIGGVLGKLCEAQGIPYTYGSGRLEDRRSLIADLDSVNP
SHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLVLINYATGCIFEYDS
GHPLGSGLGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFI
TKITRYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKEFVD
PSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELLSIKESLVKFVFEPNKKTEIKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgaagcaaacggctcatcttcatctctcaacttcttaatctacggccgaaca
ggctggatcggcggtgttctcggcaagctctgcgaagctcagggaatcccatacacctac
ggttcgggccggctcgaggatcgccggtcgctcatcgccgatcttgattccgtcaacccg
agccatgttttcaacgccgccggagtcaccggacgaccgaacgtggactggtgcgagtcc
cacaaggtggagaccatccgtacgaacgttgtcggaaccttgactctggccgacgtttgc
agggagagaggcctcgtgctgatcaactacgccaccggttgtatattcgagtacgattcg
ggtcatcctctcgggtcgggtctcgggtttaaagaagaggacacacctaacttcaccggt
tccttctactccaagacaaaggctatggtagaggaactgctcaagaactatgagaacgta
tgcacgctccgtgtaaggatgcctatctcatcagatctctcgaacccgagaaacttcatc
accaagataactcggtatgagaaagtcgtggacataccgaactcgatgacgatcctcgat
gagcttctccctatctctctcgagatggcgaagaggaacctaactgggatatggaacttc
actaatccgggggtggtgagccacaatgagatactagagatgtataaagagtttgtcgat
ccgagtttcacttggaagaacttcacgttggaagaacaggcgaaagtgattgtagctccg
aggagtaacaatgagcttgatgccactaagttgaaaacagagtttccggagttgttgtct
ataaaggaatctcttgttaagtttgtcttcgaaccaaataagaagacagagatcaaaggt
tga
DBGET
integrated database retrieval system
