Raphanus sativus (radish): 130510610 Help Entry 130510610         CDS       T06014                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism rsz  Raphanus sativus (radish) Pathway rsz04142   Lysosome biogenesis rsz04145   Phagocytosis rsz04148   Efferocytosis Brite KEGG Orthology (KO) [BR:rsz00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     130510610    04142 Lysosome biogenesis     130510610    04148 Efferocytosis     130510610  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rsz04131]     130510610 Membrane trafficking [BR:rsz04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     130510610    Hops complex     130510610 SSDB OrthologParalogGFIT Motif Pfam:  Pep3_Vps18 VPS18_solenoid_2nd VPS18_solenoid_1st VPS18_RING_C Clathrin zf_RING_Vps8 Nup54_57_C zf-RING_11 zf-RING_Vps41 zf_RING_Vps8_fungal Beta-prop_VPS8 zf-C3HC4 SSNA1 zf-RING_UBOX zf-rbx1 Motif Other DBs NCBI-GeneID:  130510610 NCBI-ProteinID:  XP_056863053 UniProt:  A0A9W3CLZ1 LinkDB All DBs Position 1:complement(5692572..5699040) Genome browser AA seq 988 aa AA seqDB search MDQGRQVFSVDLLERYAAKNRGMITCMAAGNDVIVLGTSKGWIIRHDFGVGSSYDIDLSV GRTGEQSIHKVFVDPGGSHCVATVTGVGGAETFYTHAKWLKPRVLSRLKGLLVNSVAWNR QQITEVSTKEIILGTQDGQLFEMAVDEKDKREKYIKFLFELEELPEAFMALQMETANISS GMRYYVMAVTPTRLYSFTGIGTLESVFASYKERAVHFMELPGEIPNSELHFFIKQRRAVH FAWLSGTGIYHGGLNFGAQHSYPNGDENFVESKALLDYSKLSDGTEIVKPSSMALSEYHF LLLIGNKVKVVNRISEQIIEELQFDITADSASRGIIGLCSDASAGLFYAYDQNSIFQVSV IDEGRDMWKVYLDLKVFAAALANCRDPLQRDQVYLVQAEAAFADKEYLRAASFYSKINYV ISFEEVTLKFISINEPEALRTFLLRKLDTLSKDDKCQITMISTWATELYLDKINRILLED DTAIENRNSEYHSVIQEFRAFMSDCKDVLDEATTMKLLESYGRVEELVYFANLKEQYEIV IHHYIQQGEAKKALEVLQKSSVSDELQYKFAPELIMLDAYETVEAWMASKNLNPRRLITA MMRYSSEPHAKNETHEVIKYLEFCVHSLHNEDPGIHNLLLSLYAKQEDDSALLRFLQCKF GKGRENGPEFFYDPKYALRLCLKEKRTRACVHIYSMMSMHEEAVALALQIDPELAMAEAD KVEDDEDLRKKLWLMVAKHVVKQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNKQIEQLKEEMNDATRGADNIRNDISALTQRYAVIDREEECGVCK RKILTMTGDFRMAQGYTSSGPLAPFYVFPCGHSFHAQCLITHVTSCAHEEQAEHILDLQK QLTLLGSETRRDINGNRSDEPVTSTTTADKLRSELDDAIASECPFCGELMINEITLPFIK PEETQHSASWDLRPQTNLANQRTISLPV NT seq 2967 nt NT seq  +upstreamnt  +downstreamnt atggatcaaggaaggcaagtgttttcagttgatcttctagagagatatgccgcgaagaat cgtggcatgatcacatgtatggctgctggaaacgatgtaattgttctgggaacaagcaaa ggatggatcatccgccatgattttggcgttgggagttcttatgatatcgatctctctgtt ggtcgaactggtgagcaatcgattcacaaggtttttgttgaccctggtggtagccattgc gttgctacggtgactggtgttggaggagctgaaactttttatactcatgctaaatggctt aagccgcgtgtgttgagccgcttgaaaggtttgctggttaactcggtcgcttggaacagg caacagattacagaagtttcaactaaggagatcatcctgggtactcaagatgggcagcta tttgagatggctgttgatgagaaagataagagagagaagtacatcaagtttttgttcgaa ctagaagaacttccggaggccttcatggctttacagatggaaacagccaacatcagcagt ggaatgagatactatgtgatggctgtaactcccactcgactctactcgttcaccgggatt ggaacattagaatctgtttttgctagttataaagaacgtgcagttcattttatggaactt cctggggaaataccaaacagtgaactacatttctttataaagcaacgaagagctgtgcat tttgcgtggctttcaggaacaggaatttatcatggtggcctaaattttggtgctcaacac agttacccaaatggtgatgagaactttgtggagagcaaagcgctcttagactactcaaaa ctgagtgatggcactgaaatagtcaagcctagttcgatggcactctcagaatatcatttc ttgcttcttattgggaataaggttaaggtagtgaatcggataagtgaacaaatcattgaa gagctccagtttgatataacggcagattcagcttcgaggggcataattggactttgcagc gatgcatctgctggtcttttctatgcgtatgatcagaattcgatctttcaggtttctgtg attgatgaaggcagagatatgtggaaggtttacctagacttgaaagtttttgctgcagct ttagcaaactgccgtgatcccctccagagagaccaagtttatttagttcaggcagaggct gcatttgccgacaaggaatatctgcgagcagcatcattctattccaaaatcaattatgta atatcttttgaagaggttacgttgaagtttattagtataaacgaaccggaagctttgaga acattcttgttacggaagcttgatactctttcaaaggatgataaatgccaaattacaatg atatcaacatgggcaactgagctgtatctggacaagataaatcggatacttttggaagat gatactgctatagaaaaccgtaactcagagtatcactcagtcattcaagaattccgtgct ttcatgagcgactgcaaggatgtattagatgaggcaaccaccatgaaacttctagagagt tatggtcgggttgaagagttggtatattttgcaaacctgaaggagcaatatgaaatcgtt attcaccattatattcagcaaggggaagcaaagaaagctttggaggtgctccagaaatct tcagtttcagatgagcttcagtataaatttgcgccagaacttatcatgctcgacgcgtat gaaaccgtggaagcatggatggccagtaaaaatcttaatccaaggagactaattactgca atgatgcgttactcaagcgaaccacatgcaaagaacgaaacacatgaagtcataaaatat cttgagttttgcgtccatagtttgcataacgaggatccagggattcacaatttacttctc tcattatacgccaagcaggaagatgacagtgccctcctccgtttcctgcaatgcaaattt gggaaaggacgagagaacggtcctgaatttttctacgatcccaaatacgcgttgcgcctg tgtctcaaggagaagagaactcgtgcttgtgtccatatatacagcatgatgtctatgcat gaagaggcggtggcccttgctcttcagattgacccagaacttgctatggctgaggctgat aaggttgaagatgatgaagacttgagaaagaagctgtggctgatggttgctaagcatgtc gtcaaacaggaaaagggagcgaaaagggaaaacataaggaaagcgattgcctttctcaag gaaactgatggccttctaaagattgaagatattttgccgttctttccggactttgcctta attgatgacttcaaggaagcgatatgctcatctctggaggattacaacaagcaaatagaa caattgaaagaggagatgaatgatgccacacgtggtgcagataacattagaaatgatatc agtgccctaactcaaagatatgctgtaatcgaccgtgaagaggaatgcggggtttgtaaa cgtaaaatcttgacgatgaccggggatttcagaatggctcagggatatacttcatccgga ccactggctcctttctatgtttttccttgtgggcactctttccatgcgcagtgcctgatt acacacgtcacaagctgtgcacacgaggagcaagccgagcatatactcgatctgcagaag cagctgacattgcttggtagcgaaacccggagggatataaatggtaatcggtctgatgaa cctgtaactagcacaactactgcagacaagcttcgatcagaactagatgatgctatcgcc agcgaatgccccttctgtggagaattaatgatcaatgagatcactctgccttttatcaaa cctgaggaaacacaacactctgcttcatgggacctccgaccacagacaaacttagcgaac cagaggaccatttctttacctgtttga

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