Raphanus sativus (radish): 130510679
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Entry
130510679 CDS
T06014
Name
(RefSeq) ABC transporter G family member 42-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130510679
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
130510679
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
130510679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
AAA_21
ABC2_membrane_7
ABC2_membrane_3
AAA_29
AAA_28
AAA_25
AAA
AAA_16
RsgA_GTPase
ABC_trans_N
Rad17
PDR_CDR
RuvB_N
ATPase_2
AAA_11
Motif
Other DBs
NCBI-GeneID:
130510679
NCBI-ProteinID:
XP_056863214
UniProt:
A0A9W3DHC6
LinkDB
All DBs
Position
4:complement(8027507..8033591)
Genome browser
AA seq
1389 aa
AA seq
DB search
MATPQIAGDENGNVGAEEVRSQWASIERLPTFERITTALFWNRDEQGKRNERRVMDISKL
EDLDRHLFIDDLIKHVEDDNLRLLQKIKNRIDEAGLELPKIEVRFSDLFVEAECEVVYGK
PFPTLWNAIASRLSGIMCLKKEKNISILNGVSGIIRPKRMTLLLGPPSCGKTTLLLALAG
RLDSSLKITGDVSYNGHLLSEFVPEKTSTYVSQNDLHIPEITVRETLDFSGCFQGTGSRL
ETMKEISRREKLKGIVPDPDIDAYMKATSIEGSKTNLQTDYILKILGLSFCADTRVGDTS
RPGISGGQKRRLTTGETVVGPIKTLFMDEISNGLDSSTTFQIVSCLQHYALMSEGTIVVS
LLQPAPETFELFDDVILMGEGKIIYIGPRDYICRFFEDCGFKCPTRKYVAEFLQEVLSRK
DQEQYWCHIDKPYCYVSIDTFIERFKKSDVELQQQEELSKTFDKSQAQKDALCLRKYSLS
NWDMLKACSRREFLLMKRNSFVYVFKSVLLICIGSITMTVYLRTGSKRDVINANYLMGSL
FFSIFKMLADGLPELTLTISRLSVFYKQKELYFYPAWTYAVPSAILKILISVLEAFMWTS
LTYYVIGYSPDIGRFFRQFLIFFALHLSCISMFRAIAATFRDFVLAITIGSVYVVLLSLF
GGFVLRKPSMHAWLQWGFWLSPLSYAEIAITSNEFFSTQWSKRTSGNRTLGEEVLDARGL
NFGDQSYWSAFGALIGFAFFFNIVFVMALTFLTTSNRSRAIVSSDDDNSQSSGNHNKSSS
KAASQSKNTLPFKPLTFTFQDVCYFIQTPQGKKVQLLSNVTGAFKPGVLTALMGVSGAGK
TTLMDVLSGRKTRGDIEGEIQVGGYRKVQETFARVSGYCEQFDIHSPNLTIEESLEYSAW
LRLPSSINSETKRAIVREVLETIELEDIKDSIVGLPGVSGLTTEQRKRLTIAVELVANPS
IIFMDEPTTGLDARAAAIVMRAVKNITETGRTVVCTIHQPGTDIFEAFDELVLMKYGGRI
IYHGPLGQHSNNVIEYFMRIPGVQEMKENTNPATWQLDITSRSSEDKLGVDLAQIYKESS
LFKENNIVIEQLRGTSSETEELTSSMRYAQTGWGQFKACLWKQHLSYWRNPSYNLTRILF
MCFTSVICGFLFWQKAKKINTQQDLFNVLGSMYTVVLFTGINNCSTVLFCIATERNVFYR
ERFAQMYTSWAYSLAQVLVEIPYSLVQSILCVVIVYPMVGYHFSVYKVFWSFYSVFCSLL
IFNYFGMLLVVITPNIHVAFTLRSGFYSMVNLFAGYVMPKPSIPKWWIWMYYLSPTSWVL
NGLLTSQYGDMENEVMAFGEKKKVSAFVEDYFGFRYDSLALVAIILIAFPILLASLFAFF
IGKLNFQKK
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcctcaaatagctggagatgaaaatggtaatgttggtgctgaggaggttcgc
tctcaatgggcttctattgagagattaccaacgtttgaaaggatcactactgctctgttc
tggaacagagatgaacaagggaagagaaacgagagacgagtcatggatatttctaaactt
gaggatcttgatagacatctctttattgatgatctcattaaacatgttgaggatgataat
ctcaggctactgcaaaaaatcaagaacagaatcgatgaggctggtctcgagttaccgaag
attgaagtgaggttcagtgatctttttgtggaagcagagtgtgaggtagtttatggaaag
ccattcccaacactttggaatgctattgcaagcagactatctggaatcatgtgtctaaag
aaagaaaaaaatataagcatcttgaatggcgtcagtggtatcataaggcctaaaagaatg
actttgttgcttggtcctcctagttgtggtaaaactactctgctacttgcactagctgga
agactagactcttctttgaagattacaggagacgttagttacaacggtcacttattatca
gagtttgttcctgaaaaaacatcaacttatgtaagtcaaaatgatctacatattccagag
attactgtgagagagacactcgatttttcaggatgttttcaaggcacaggaagccgttta
gaaactatgaaagagattagtagaagggagaaactgaaaggaatagttcctgatcctgac
atagatgcatacatgaaggcaacttctattgaaggttcaaaaactaatctgcaaactgat
tatatcctaaagatcctaggactcagtttctgtgcagatacacgcgttggagatacttca
agaccaggaatatctggtggccaaaagagaagattaactacaggtgaaacggtcgtaggt
ccaatcaaaactctgttcatggatgaaatatcaaatggtttggacagctcaacaacattc
cagattgtatcttgtctccaacattatgcacttatgtctgaaggaaccatagtggtttca
ttgcttcagcctgcaccagaaacatttgagcttttcgacgatgtgattcttatgggagaa
ggaaagataatctacattggtccaagggattatatttgcagattctttgaagactgtgga
tttaaatgtccaacaagaaaatatgttgctgagtttctacaggaggttctctcaaggaaa
gatcaagaacagtattggtgtcacatagacaaaccatattgttatgtctccattgacaca
tttattgagaggttcaaaaagtctgatgttgagttacaacaacaagaagaactctccaag
acatttgacaagtctcaggctcagaaagatgctttatgcttaagaaaatactcacttagt
aactgggatatgttaaaagcttgctcaaggagagagtttcttctgatgaaacgaaactct
tttgtttatgtattcaagtctgtacttttgatttgcattggatctattacaatgactgtt
tatctaaggactgggtctaaaagagatgttatcaatgctaattatcttatgggttctttg
ttcttttcaatctttaaaatgcttgctgatggacttccagaactcacactaacaatctca
aggctttcagtgttctacaagcaaaaagagttgtacttttatcctgcttggacatatgca
gttccttcagctattttaaagatactcatttcagttcttgaagcgtttatgtggacgtcg
ctgacatattatgtaattggttatagtcctgatattggcaggttctttcgccagttcttg
atcttctttgctttacacctttcatgtatatcaatgttccgtgctatagctgctaccttt
agagatttcgttcttgccataacaattggatcagtatatgtagtgcttctctcattattt
ggaggattcgtacttaggaaaccgtccatgcatgcttggcttcagtggggtttctggctc
tctccattgtcatatgctgagattgctataacatcaaatgagtttttctctacacagtgg
agtaagagaacatctggaaacagaaccttaggggaagaagttcttgatgctcgagggctg
aactttggtgaccaatcatactggagtgcatttggtgctttaattggcttcgcattcttc
ttcaatattgtttttgtaatggctttgacatttctaacgacttcaaataggtctcgtgcg
attgtgtctagtgatgatgataacagtcaaagttcaggaaaccataataagtcaagttct
aaagctgcttcccagtccaaaaatacattacctttcaagccccttactttcacatttcaa
gacgtctgttatttcatccaaactcctcagggcaagaaggtgcagctcctctctaacgtt
acaggggcattcaagcctggtgttctcactgctctaatgggtgtgagtggtgctggtaaa
acgactctgatggatgttctttctggaaggaaaacccgcggtgacattgaaggagagatc
caagtaggtggttaccgtaaggttcaagaaacctttgcaagggtttcaggttattgtgag
cagtttgatattcactctcctaatttaaccatagaagagtccttggaatactctgcttgg
cttcgacttccttctagcatcaactcagaaacaaagagggcaatagtaagagaagttctt
gagacgatagagctggaggacattaaagattccatagtaggacttcctggagttagtggt
ttaacaacagaacaacgcaagagactaacaatagctgtggagcttgttgccaatccttca
atcatattcatggatgaaccaaccacaggattagatgcgagagctgctgcaattgtaatg
agagctgtgaagaacatcacagagactggcagaactgttgtttgcaccattcaccaaccg
ggaactgatatatttgaagcatttgatgagctggttttaatgaaatatggaggaaggatt
atctatcatggacctcttggacaacattcaaacaatgttattgaatactttatgagaatt
cctggagttcaggaaatgaaagagaatactaatccagccacttggcaactagacattact
tcaagatcatcagaagacaaacttggtgttgatttggcccaaatctacaaggaatcttct
ttgtttaaagagaacaacatagtaatagagcaactgagaggtacatcttcagaaacagaa
gaacttacctcctcgatgcgatatgctcaaacgggttggggacagttcaaggcatgccta
tggaaacaacacctctcatattggagaaacccttcctacaatctcactcgcatcctcttc
atgtgttttacctctgtgatctgtggctttttgttctggcaaaaggctaagaaaataaac
actcaacaagatcttttcaatgtattgggctcaatgtacacggtggttcttttcactgga
ataaacaactgctctacagtgttattctgcattgctaccgaaagaaatgtcttctaccgc
gaaagatttgctcaaatgtacacctcatgggcctactcccttgcacaggtgttggttgag
attccatactcattagtccagtctattttatgtgtggtaatcgtatatcctatggttggc
tatcacttctcggtctacaaagtgttttggagcttctactcagtcttctgctcgttgctc
atattcaactactttggcatgcttttagtcgtcatcaccccaaatattcacgttgctttt
actctccgttcgggcttctactcaatggtcaatctcttcgctggttatgtcatgccaaaa
cctagcattccaaaatggtggatatggatgtattacttgagccctacgtcatgggttttg
aatggattgctcacatctcagtatggagatatggagaatgaggttatggcatttggagag
aagaagaaggtttcagctttcgtggaagactattttggtttcagatatgattctttggct
cttgtagctatcattctcattgccttccccattctattggcttctcttttcgcattcttc
atcggtaaactcaatttccaaaagaagtga
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integrated database retrieval system
