Raphanus sativus (radish): 130511362
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Entry
130511362 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130511362
Organism
rsz
Raphanus sativus (radish)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
zf-RVT
RVT_3
RNase_H
Mistic
Motif
Other DBs
NCBI-GeneID:
130511362
NCBI-ProteinID:
XP_056864290
UniProt:
A0A9W3DK84
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Position
4:41976820..41980298
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AA seq
1125 aa
AA seq
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MFPASCCNYLRYEGSDHRPLLTYLDAKKVKKRRPFRYDRRLNDNEDARKIIEEAWQKGAE
ETVEIKISRCRKEIIKWSKIQKEICTKAMILNQQELEKELSAAVPDSGRIVILTEALSKA
YREEELFWRQRSRILWLQGGDRNSAFFHAVTKVRTARNQITTIENAEGVPTYEEEDVGKV
FEKFYQQLYSSNGESDFSTVEETITCGVTEEMNDSICKIPDQEEVRQALFSINGGKAPGA
DGFSASFYQSFWSLLGPDIYREIRSFFTTGTMTPRINETHVCLIPKIEAPKTAAEYRPIA
LCTVRYKIIAKLLTKRLQQFLPSLISQHQTAFVPGRAISDNILVTHETLHYLKNSEAVKR
CSMVIKTDMSKAYDRIEWDFLEQVLSKLGFRDICIRWIMECVTTVTYSFLINGAPQGMTT
PSRGLRQGDPLSPYLFILCTEVLSGLCKIAQGNGRLLGLQVSQRSPYVNHLLFADDTMIF
CKTNERNCRALSDILKRYELSSGQCINQSKSTITFSSKTPESIKERVKSALGITNEGGMG
KYLGLPETFGRRKKDVFTGMVDKIRQRSQSWTTRFLSGAGKHVMLQSVLTALPTYSMSSF
KIPISLCKRIQSILTRFWWDSSPDVHKIAWVAWSTMALPKSMGGLGFKNFEEYNDSLLAK
LGWRIMHNPDSLLSRVLKGKYFPDNSFLESGAKSGASHGWISVMAGKAVLEKGLGFIVGN
GESIKVWSDRWLSSSKPEAPIGPPTLDNQELMVADLLNPQTNDWDLEKIRLHLPQYEEKI
RLIIPSSLKPRDRQVWLPDASGIYSAKSGYRKLFEEELVQPNQFDWKKEVWNLKVPPKIQ
HFLWRVLKEAIPVGSLLAIRGIQSALNCKRCGELESISHLFTSCPFAVQFWSQVPLLPPT
ANQAPSLLFSDWYSSQVHRAGLPPLGVISSPLVPWFLWNLWTARNKLVFEGKVYQVEDII
SKAIAEARAWEDANLGKKTLQLKLPSGSSQKLSPYLCWIDGAWQESSRSGGMGWIIKNRE
GAVICRGSSNRTHVGSALIAEALALRNALKQAKDLLLPSLHIFSDSQVLVTTLCEGRDMN
EIAGILTDIRNLATLFCPISYSFIPRLENTQADSLARASLARLVM
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagcaagctgctgcaattacctccggtatgagggctcggaccaccgtccactc
ttgacatatttggacgcgaagaaggtaaaaaagaggagaccgttcagatatgataggcga
cttaatgacaatgaagatgctcggaaaataattgaagaagcttggcaaaagggtgcggag
gagactgttgagatcaagatatcgagatgcaggaaagaaatcatcaaatggtcaaaaatt
caaaaagaaatctgcacaaaggccatgattctcaatcagcaggaattggaaaaagaatta
tcagcagcagtaccagactctggtaggattgtgatactcacggaagcactaagcaaggcg
tatagagaggaagagcttttctggaggcaaaggagcagaatcctatggttgcaaggagga
gacagaaacagtgctttctttcatgcggttactaaggtcagaacagcgagaaatcagatc
actaccattgagaacgcggagggagtacctacatatgaagaggaagatgtagggaaggtg
ttcgagaagttctaccagcaattgtactcctctaatggtgaatcagatttcagcacagtg
gaagaaacaattacatgtggagttacagaagagatgaatgactccatatgtaaaatcccg
gaccaggaggaagtgcgacaagccctcttttctataaatggaggcaaggcaccgggagcc
gatggtttttctgcaagcttttaccagtctttctggagtctgttgggaccagatatttac
cgagaaattcggagcttcttcactacgggtacaatgaccccccggatcaatgagactcac
gtgtgcttgatcccaaagatagaagcacctaagacggccgcggaatacagaccaatagcc
ctctgcacagtgagatacaagatcattgcgaagctgctcaccaaacgtttacaacagttc
ctcccatctctgatttcgcagcatcaaacagcgtttgttccgggtagagctatctcagat
aacatcctggtcacccatgagactcttcattatctgaagaattcagaagcagtgaaaagg
tgctccatggtcatcaaaacggacatgagcaaggcgtacgaccgcattgaatgggacttc
ttggagcaggttcttagtaagctggggtttagagatatttgcatcagatggattatggaa
tgtgtcactacggtgacgtactccttcctcataaatggagccccgcaaggaatgactaca
ccatcacgaggcctaagacaaggagacccactctctccctatctctttatcttatgtact
gaggtgctgtcgggtctgtgtaaaatcgctcaagggaatggaagactgctcggattacaa
gtctctcagagaagcccgtatgttaatcacctcctcttcgcggacgacaccatgatattt
tgtaaaacgaacgagaggaactgtcgagcattgagtgatatcttgaaaaggtatgagcta
agctcaggccagtgcatcaatcagtctaagtctaccattactttctcgtctaaaactccg
gagagcatcaaggaaagagtgaagtctgcgctgggtatcacaaatgaagggggtatggga
aagtacttaggcctccctgaaacttttggtagaaggaaaaaagatgtgtttactggaatg
gttgacaagattaggcagagatctcagtcctggactactcgcttcctgtcgggtgctgga
aaacacgtcatgctccagtcagtgctaacggcactccctacctactcaatgtctagcttc
aaaatcccaatatctctctgcaagagaattcagtctatcttgactcgattttggtgggac
agttcaccagatgtgcataagatagcgtgggtagcttggagtacaatggctctaccaaaa
tccatgggaggactaggcttcaaaaactttgaggagtacaacgactctctcttggcaaaa
ttaggctggagaattatgcacaacccggactcactactgtcaagagttctcaaaggaaaa
tattttccagataactctttcttggagagtggtgctaaatcaggggcatctcatggttgg
ataagcgtgatggcagggaaagcagttctggagaaaggattgggttttattgtgggcaat
ggagaaagtatcaaagtctggtcagacagatggctctcctcctctaagccagaagctcca
ataggcccacccacactagacaaccaagagctgatggtggcagatctactgaacccgcag
acaaatgattgggatttagagaaaatccgtttgcatttacctcagtatgaggagaaaatc
cgattaatcatccctagctctctgaaaccaagggatagacaagtctggttacctgatgca
tcaggaatttattcagctaaatcagggtataggaagctctttgaagaggaactggtacaa
ccgaaccagtttgattggaaaaaggaagtgtggaatttaaaggtaccaccaaagatacaa
cacttcctgtggagagtgctgaaagaggcgattccagtgggttctctactagcgataaga
ggaatacaatcagcactgaattgcaaaagatgtggagagttggaatctatttcacattta
ttcacctcctgtccttttgcagtccagttctggtcacaagtccctctcttacctccaacc
gcaaatcaggctcctagcctgttattctcagactggtattcttctcaagtgcaccgagca
ggccttccccctttaggagtgatctcatctccacttgtaccctggttcttgtggaatttg
tggacagcaagaaataagctagtttttgaagggaaagtgtatcaggtggaagatatcata
tcaaaggcaatagcagaagcccgagcttgggaggatgcaaatttaggaaagaagacgttg
cagttgaagcttccatcaggtagctcacagaaactcagcccttacttatgttggattgat
ggggcttggcaggaatcctcaagatcaggaggtatgggatggatcatcaagaacagagaa
ggtgctgtgatatgtcggggttcttcaaacagaacccatgttggatcagcacttattgca
gaagcgcttgcgctaagaaatgctctcaagcaggcgaaagatctactcctcccaagcctc
catattttctcggactcacaggtcctcgttactaccctttgtgaagggcgggatatgaat
gagattgcaggtatccttactgatataaggaaccttgccactctcttctgtccaatttcc
tactcttttattcctcgtcttgaaaacactcaggcagactctttggcaagagcaagccta
gctcgtttagttatgtaa
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