Raphanus sativus (radish): 130511700
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Entry
130511700 CDS
T06014
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 9 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130511700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
130511700
Ion channels [BR:
rsz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130511700
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
130511700
NCBI-ProteinID:
XP_056865089
UniProt:
A0A6J0N7B4
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Position
4:complement(1944572..1948202)
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AA seq
740 aa
AA seq
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MFDCVKTSVKSQVISGQREKFVRLDSMDSRYSQGAEAGLNRCTLNLQGPPRVGGSVQGNN
NASSGSFKKGFRRGSKGLWSLGRSIGLGVSRAVFPEDLKVSERKIFDPQDKFLLLCNKLF
VTSCILAVSVDPLFLYLPFINDSDKCIGIDRGLAIIATTLRTFIDAFYLFRMALQFRTAF
VAPSSRVFGRGELVIDPAQIAKRYLQQFFIVDFLSVLPLPQIAVWRFLYTSTGGSVLATK
QALRSIILVQYIPRFIRIYPLSQELKRTAGVFAETAWAGAAYYLLLYMLASHMVGALWYL
LALERVNGCWKKACFDQRPNCTRNFLFCGNENMVGYAAWNGIKESVLQKSCPVNVTDGDN
PPFDFGIYLRALSSGIVSSESFVAKYFFCLWWGLQNLSTLGQGLQTSTYPGEIIFSIALA
VAGLLLFALLIGNMQTYLQSLTIRLEEMRVKKRDSEQWMHHRMLPPDLRERVRRYDQYKW
LETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMEERLLDAICERLKPCLYTE
NSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSG
SNLPSSTRTAKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIFI
QAAWRRYVKKKKLEQLKKEEEEEEGEGEGHVASIRATFLASKFAANALRKVHQNRIAAKS
TKELVKFQKPSEPDFSADDP
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgtgtcaaaacatcagtgaaatcacaagttatcagtggccaacgcgagaag
ttcgtaaggttggatagtatggattctagatactctcagggtgctgaagcaggtctcaac
agatgcacactcaatctccaaggaccaccacgtgttggtggtagtgttcagggtaacaac
aatgcatcttctggttcgtttaagaaaggttttagaagaggctccaaaggtctctggtct
ctaggaagatcaatcggtctcggcgtctcgcgagcagtcttccccgaagatctcaaagta
tcagagaggaagatattcgatccgcaggacaagttccttttgctgtgcaacaagctcttc
gtcacttcctgcatcctcgccgtctcggtggaccctctcttcctgtaccttccgtttatt
aacgacagcgacaagtgtatcggcatcgaccgggggttggctatcatagcgacgacgctg
aggacgttcatcgatgcgttttatcttttccgcatggctctccagtttaggacagctttc
gtcgccccttcttcgagggtttttgggagaggagagcttgtgatcgaccctgcgcagata
gctaaacggtatctgcagcagttcttcatcgttgacttcctctctgttcttccacttcca
cagattgcagtttggaggtttctgtacacatctacaggagggagtgtgttggcgacaaag
caagcgttacgttccatcatcctagtacagtacattccgcggtttattcggatctatccc
ttaagccaagagctaaagagaacagctggggtgtttgctgagacagcttgggctggtgct
gcttattacttgctactctacatgcttgctagtcacatggttggggcgttatggtactta
ctggctttagaacgcgtcaacggttgctggaagaaggcttgctttgatcaaagaccgaac
tgcaccagaaactttttgttttgcggtaacgaaaacatggtcggttatgctgcttggaac
ggaatcaaagagtctgttctccagaaaagctgtcctgtcaatgtcactgatggcgacaat
cctccttttgatttcggaatctacttgagagcactgtcctctggcattgtctcgtctgag
agctttgtagctaaatacttcttctgtctgtggtggggacttcagaatctcagcactctc
ggtcaagggcttcagacaagcacgtaccctggagagatcatattctccatagcacttgct
gttgctgggcttcttctctttgctctcctcattggtaacatgcagacttatctccagtct
cttacgatccgtctcgaggagatgagggtgaagaagcgtgactcggagcagtggatgcat
caccggatgcttccacctgacctgagagaacgggtcagacgttatgaccagtacaagtgg
ttggagacgcgcggtgttgatgaagagaatctggttcagaacctcccaaaggatctgaga
agagacatcaaacgtcatctctgtctagctttggtccggagggttcctctgtttgagaat
atggaagagaggctgctcgatgcaatatgcgagaggttgaagccgtgtctatacacggag
aactcttacctggtccgggaaggtgaccctgtcaacgagatgctcttcataatccgtggc
cggctagagagtgtgacgacggatggtgggagaagcggtttcttcaaccgtagtttgctc
aaagaaggagacttctgcggggaagagcttctgacgtgggcgcttgatcccaaatccggc
tccaacctaccttcctccacaagaaccgcaaaggctttaaccgaagtggaagcgtttgct
ttgatagcagatgagctcaagttcgtggcgagccagttcaggagactgcacagcaggcag
gttcagcatacttttagattctactcgcagcagtggaggacttgggctgctatcttcata
caagctgcgtggagacggtacgtgaagaagaagaaacttgagcagcttaagaaggaagaa
gaagaggaggaaggagaaggagaagggcatgttgctagcattagagctacgttcttggcg
tcaaagtttgcagcgaatgcacttcgtaaagttcaccagaaccgtattgcagcaaagtct
accaaagagcttgtgaagtttcagaaaccttctgaacctgatttctctgctgatgatcct
tga
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