Raphanus sativus (radish): 130511783
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Entry
130511783 CDS
T06014
Name
(RefSeq) RAN GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130511783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130511783
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130511783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_1
LRR_4
LRR_8
LRR_NXF1-5
DUF562
Motif
Other DBs
NCBI-GeneID:
130511783
NCBI-ProteinID:
XP_056865392
UniProt:
A0A9W3DNJ8
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Position
4:complement(50203845..50206002)
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AA seq
525 aa
AA seq
DB search
MDHRSVKTTTPTVITVKMWPPSKSTRLMLVERMTNNLSTPSIFSRKYGLLTPQQAQQDAN
RIEDLAFSSANKHFQNQPDGDDGTSAVQIYAKESSKLMLQAIKRGPKGRLFDLSGGRRAF
IDEAEARELLRPLADPTNNSYTKIRFTNRSFGSEAAKIAVTVLSSIKHQLREVDLSDFVA
GRPEAEAIEVMNMFSSALEGSKLRYLDLSDNALGEKGIRAFASLIKSQRDLEELYLMNDG
ISEDAARAVRELLPSTAKIRVLQFHNNMTGDEGAVAIAEIVNNCPCLEDFRCSSTRIGSE
GGVALAEALESCGRLKKLDLRDNMFGVEGGIALGMSLSVLSELTEIYMSYLNLEDEGTEA
LSEALINSAPSLRVLELAGNDITVESTGKLADCIASKQCLSKLNLSENELKDEGTVLIAK
ALDEGHDQLAEVDMSTNMMRRAGARALAQTVLKKQSFKLLNINGNFISEEGVDEVNDMFK
DSPDKLGLLDDNDPDGEEDFEDEDEEEDSELEAKLGGLKIKQEEE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcgttcagttaaaaccactacaccaacggttataacagtgaagatgtggcca
ccgagtaagagcacacgcctgatgctcgtggaacgcatgaccaacaacttatcaacacct
tccatcttctcccgtaagtacggtcttctgactcctcaacaggcccagcaagacgccaac
cgcatcgaagacctcgctttctcctctgccaacaaacacttccagaaccagcccgatggc
gacgacggcacatctgctgttcagatctacgccaaagaatccagcaagcttatgctccaa
gccatcaaacgtggtccgaagggtagattgtttgatttatcaggtggacgtagagccttc
atcgatgaagccgaggcgcgcgagcttctgaggcctttggctgatccaactaataactct
tacaccaagatccgttttacgaaccgtagcttcggatccgaagctgccaaaattgctgtt
accgttctgtcttccatcaagcatcagctgagggaagttgatctctccgatttcgtggcg
ggaagaccagaggcggaagcaatcgaagtgatgaacatgttttcgtctgccttggaagga
tccaagcttaggtatttggatctatccgacaacgcattgggtgagaaagggatccgagcg
tttgcgtcactcatcaagtctcagcgtgacttggaggagctttatctgatgaacgacggc
atctccgaggacgctgcgagagccgttcgcgagctgcttccttctactgccaaaatcagg
gttctccagtttcataacaacatgactggagacgaaggagccgttgccattgctgagatt
gtgaacaactgtccttgtttggaagatttcaggtgttcttctacgaggattggttccgaa
ggaggtgttgcgcttgctgaggcgcttgagtcttgtggacggttgaagaagcttgatctc
cgtgacaacatgtttggagtcgaaggtgggattgctctgggaatgagtttatcggtgttg
agtgagttaactgagatctatatgagttatttgaacttggaggatgagggaacagaggcg
ctttccgaagctcttatcaactctgctccttctcttcgagttcttgaattggctgggaat
gatattaccgtggaatccactgggaaactggcagattgcatcgcctctaaacagtgtctt
tcgaagctgaatttatctgagaatgagctcaaggacgaagggactgtcttaatcgcaaag
gcgcttgatgaaggtcatgaccagttggctgaagttgacatgagcaccaatatgatgaga
agagctggggcaagagccttggcgcaaactgttttgaagaaacagagtttcaagcttctg
aatattaatggaaacttcatatctgaggaaggtgtggacgaggtgaatgacatgtttaag
gactccccggacaagcttggtcttttggatgataatgaccctgacggtgaagaagatttt
gaagatgaagacgaagaagaagacagtgaactggaagcaaagctcggaggactgaaaatc
aagcaagaggaggaatag
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