Raphanus sativus (radish): 130511900
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Entry
130511900 CDS
T06014
Name
(RefSeq) myosin-15-like isoform X1
KO
K10357
myosin V
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130511900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130511900
04131 Membrane trafficking [BR:
rsz04131
]
130511900
03029 Mitochondrial biogenesis [BR:
rsz03029
]
130511900
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rsz04812
]
130511900
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130511900
mRNA cycle factors
P-body specific factors
130511900
Membrane trafficking [BR:
rsz04131
]
Others
Actin-binding proteins
Myosins
130511900
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130511900
Cytoskeleton proteins [BR:
rsz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130511900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Tropomyosin
Zeta_toxin
AAA_16
AAA_22
TRPM_tetra
TSC22
ABC_tran
HEF_HK
Motif
Other DBs
NCBI-GeneID:
130511900
NCBI-ProteinID:
XP_056865730
UniProt:
A0A9W3DPI7
LinkDB
All DBs
Position
4:2767732..2779296
Genome browser
AA seq
1523 aa
AA seq
DB search
MESNLRRGDKVWVEDKDFAWIAGEVLDSPGNNVHVETSTGKQVFVSSGKVFRRDPEEEEE
HNGVDDMTKLTYLHEAGVLYNLQRRYTLNDIYTYTGSILIAVNPFKKLPHLYNGYMMEQY
KGAPFGELSPHVFAVSEVAYRAMIDDRRSQSILVSGESGAGKTETTKLIMQYLTYVGGRA
AEDNRSVEQQVLESNPLLEAFGNAKTVRNDNSSRFGKFVEIQFDANGRISGAAIRTYLLE
RSRVVRITDPERNYHCFYQLCASGSDAEKYKLSNPHQFHYLNQSKTYDLEGVSNAEEYKN
TRRAMDIVGISHDEQEGIFRTLAAILHLGNVEFSSGKEHDSSVVKDHESRNHLQMAADLF
RCDANLLLASLCTRTILTREGTIIKALDCNAAVISRDALAKTVYARLFDWLVDKINRSVG
QDPNSHFQIGVLDIYGFECFKSNSFEQFCINFANEKLQLHFNEHVFKMEQDEYRKEEINW
SFIEFIDNQDVVDLIEKKPIGVIALLDEACMFPRSTHESFSMKLFQNFKIHPRLEKTKFS
ETDFTLSHYAGKVTYQTETFLDKNRDYTIVEHCNLLSSSRCPFVAGLFASAPEESARSSY
KFSSVSSRFKQQLQALMETLSKTEPHYVRCVKPNTLNRPQKFENLSVLHQLRCGGVLEAV
RISLAGYPTRRNYSDFVDRFGLLAPEFMDESNDEQALTEKILRKLGLGNYQLGRTKVFLR
AGQIGILDSRRTEVLDTSAKLIQRRLRTFVAHQNFIAARACAISIQAYCRGCLSRNAYAA
RRNAAAAVLVQKHARRWLSRCAYVKLVSAALVIQSCIRADSARLKFAHQKEHRAASLIQA
RWRMHKFRTAFRHRQSSIIAIQCCWRQKLAKREFRKLKQAANEAGSLRLAKTKLEKRLED
LEWRLQLEKRLRTSGEEAKSGEISKLQKTLESFSIKLDAAKLATINECNKNAVLQKQLDI
SMKEKAAVERELNGMVELEKDNTLLKNSMNSLEKKNLVLEKELLSAKTDCNNTLQKLKEA
DNRCSELQTSVQSLEEKLSHLENENHVLRQKTFSISPERLGRILGESPQQKHSSAVVPAQ
IDRTSVFETPTPSKRIMPFSHSQSESRRSKFTAEKNVEIHELLSRCIKENLGFSDDKPLA
ACVIYKCLLHWHAFESESTAIFNIIIEGINEALKGGDENSVLPYWLSNSSALLCLLQRNL
RTNSFVNGSAQRSGRAAYGVKSPFKINGPDDGVPHIEARYPAILFKQHLTACVEKIYGLI
RDNVKKELSPLLGLCIQAPKASRGTAGKSFRSPNGVPQQFPSSQWENILKFLDSLMSRLR
ENHVPSFFIRKLVTQVFSFINLSLFNSLLLRRECCTFSNGEYVKSGITELEKWTARVKEE
FSGTSWQELSFIRQAVGFLVIHQKRKKSLDEISQDLCPALTIRQIYRISTLYWDDKYGTQ
SVSSEVVSQMRVLVDKDSSQKLTSNSFLLDDDMSIPFSAEDIDKAIPVLDPSEIEAPKFV
SEYTCALSLVKKPSTASVSKQIL
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaatctgcggaggggcgacaaggtttgggtggaggataaggatttcgcttgg
attgccggcgaagttctcgattctccgggaaacaatgtccatgtcgaaacttccaccgga
aagcaggtcttcgtctcctcggggaaggtgtttcggagggatccagaggaggaggaggag
cataatggagtggatgatatgactaagctgacttacttgcacgaggctggtgtgctttac
aatcttcagaggagatacactctcaatgatatctacacatacactggaagcattcttatc
gctgttaatccgtttaaaaagcttccacatctctacaatgggtacatgatggagcagtac
aagggagcaccattcggtgagctcagtcctcatgtttttgcagtttctgaagttgcatac
agagcgatgattgacgacaggcgaagtcagtctatactcgttagcggtgaaagtggagct
ggaaaaactgagacaactaaactaatcatgcagtatcttacatatgttggtggacgtgct
gctgaagataatagaagtgttgagcagcaagtgcttgaatcaaatcctctcttggaagca
tttgggaatgcgaaaacagttagaaacgataattccagccgttttgggaagtttgtggaa
atccaatttgacgcaaatggtagaatatctggtgcagcaatcagaacgtatcttctggag
agatcacgtgtagtccgcataacagaccctgagaggaactatcactgtttctatcagctt
tgcgcttctgggagtgacgctgaaaaatacaaactaagcaatccacatcaatttcattat
ctcaatcaaagcaagacctatgacctggagggagtaagcaacgcagaagagtataagaat
acaaggagggccatggatattgtgggcataagtcacgatgagcaggaagggatattccgc
acgcttgctgcgattctgcatcttggaaatgttgagttttcctcgggaaaagaacatgat
tcttcagtagtaaaggatcatgaatctagaaatcatttgcagatggctgctgatcttttc
aggtgtgatgcaaatcttttacttgcttctctctgcacacgtacaattctgacccgtgaa
ggtaccataatcaaagcactcgactgtaatgctgctgttattagccgggatgcactagcg
aagactgtttacgcccgtctgtttgactggttggtagataaaattaataggtctgttggg
caagatccaaactcccattttcaaattggagtcctggacatttatggctttgaatgcttt
aagagtaacagttttgaacaattttgcatcaattttgcaaatgaaaagcttcagctgcat
ttcaatgagcatgtatttaagatggagcaggatgagtacagaaaagaagagatcaattgg
agttttattgagtttattgacaaccaggatgtcgtggaccttatagagaagaaacctatt
ggggtaattgcactgttggatgaagcttgcatgtttcctagatcaacacatgagtcattt
tcaatgaagctgttccagaactttaaaattcatccgagattggagaagacaaagttttca
gagacggactttactctctctcattatgctggcaaagttacttaccagactgaaaccttt
ctggataaaaatcgtgattatactatagtggaacactgcaatctgttatcttcctcaaga
tgcccctttgttgctggactttttgcctccgcgccagaggagtctgccaggtcttcttac
aaattttcttccgtgtcttccagatttaagcaacaacttcaagccctcatggaaactctc
agcaaaacggagcctcactatgttcgttgtgtgaagccaaacacactcaacagacctcaa
aagtttgagaatcttagtgttttacatcaacttcgttgtgggggagtattggaagctgtt
cggattagtcttgcagggtatcccacacgaaggaattattcagactttgtggatcggttt
ggtctgctagccccagaattcatggatgagagcaatgatgagcaggcacttaccgagaaa
atcttgagaaagttaggtctggggaattatcagttaggaagaacaaaagtgttccttaga
gctggtcaaattggcattttggactctaggcggactgaagttcttgatacttctgcaaaa
ctcattcagcgaagactaagaacatttgttgcgcatcaaaacttcatcgctgcccgggct
tgtgcaatttctattcaagcatactgtagaggatgcctgtcccgaaatgcctatgccgcc
agaaggaatgcagcggcagcagtattggtacaaaagcatgcgcgcaggtggctgtcaaga
tgtgcatatgtgaaacttgtatcggctgcattagtaatacagtcgtgcatccgtgctgac
tcagctcgtttaaagtttgctcatcagaaagagcacagagctgcttctctcattcaggct
cgttggagaatgcataagtttcgcacagcattcaggcaccgccaatcttctatcattgct
attcaatgttgttggcggcagaagctggcgaagagagagtttagaaaacttaaacaggca
gctaatgaagcaggttctttgcgattagccaaaactaaacttgagaagcggttagaagat
cttgaatggcggttacagcttgagaaacgattgcgaacaagtggtgaggaggccaagtca
ggtgaaatatccaagcttcagaaaacattagaatccttcagcatcaaactagatgcagct
aagctggctaccattaatgagtgcaataagaatgcagtacttcaaaagcaactagacata
tccatgaaggagaaggctgctgttgaaagagaacttaatggaatggttgaactggaaaaa
gataacactctgttgaagaattcgatgaattccttggaaaagaagaatcttgttctggag
aaggagctactcagtgctaagacggattgcaataacacactacagaagttgaaggaagct
gataatagatgttctgaactccagacgagtgttcaaagcctcgaggaaaaactctctcac
ctggagaacgagaaccatgtcttaaggcagaagacttttagtatatccccagagagacta
ggacggatacttggtgaatctcctcaacagaaacactctagtgctgttgtaccagctcag
attgacaggacatctgttttcgagacacccacgccttcaaaacgcatcatgccattttca
catagccagtcagagtcacgtcgatccaaattcactgcagaaaaaaacgtggagatccac
gaattgctctccagatgtatcaaggaaaatttgggattcagtgatgataagcccctggct
gcttgtgtgatatacaaatgtcttctgcactggcacgcctttgaatctgagagcacagcc
atatttaacatcattatcgagggaattaatgaagcccttaagggtggagatgaaaacagt
gtattaccatattggctttcaaactcttcagcacttctatgcctcttgcagagaaatctg
cggacaaatagttttgtaaatggtagtgctcagcgttctgggagggcggcatatggagta
aagtctcctttcaaaattaatggacctgacgatggtgttccgcatatagaagcaagatat
ccagcaatactatttaaacagcatctgacagcatgcgtggagaagatttatggtctaatt
cgtgacaatgtgaagaaagaattatcaccgcttcttggattatgcattcaggcacccaag
gcttcacgagggactgctggaaaatcctttagatcaccaaacggtgtgccccagcaattt
ccaagtagtcaatgggaaaatatactcaaattcttggattctctcatgtcccgcctacga
gaaaaccatgtgccctcgtttttcattcgcaagcttgtgactcaggttttctcatttatc
aacctatcacttttcaacagtcttctccttcgacgtgaatgttgcacattttcaaatggg
gaatatgtgaaatctgggattacagaattggagaagtggacagcccgtgtcaaggaggag
ttttcaggaacatcttggcaggagttaagtttcattagacaagctgttggattcttggtt
atacaccagaaaagaaaaaaatcgctggatgaaatcagtcaggatctatgcccggcattg
acaataaggcaaatatatcgaataagtacgctgtactgggatgataaatatggaactcaa
agtgtctcaagtgaggtggtttctcaaatgagggtacttgttgacaaggatagcagccaa
aaattaacatcgaattcattcttgctggatgatgatatgagcattcctttctcggcagaa
gatatagataaggctattccagttttagacccatcagaaatagaagcaccgaagtttgta
tcagaatatacttgtgcactgtccctcgtcaagaaaccatccacagcttcagtctcaaag
cagatcctttga
DBGET
integrated database retrieval system
