Raphanus sativus (radish): 130512003
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Entry
130512003 CDS
T06014
Name
(RefSeq) serine/threonine-protein kinase ATG1b-like isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130512003
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rsz01001
]
130512003
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130512003
03029 Mitochondrial biogenesis [BR:
rsz03029
]
130512003
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130512003
Protein kinases [BR:
rsz01001
]
Serine/threonine kinases: Other
ULK family [OT]
130512003
Membrane trafficking [BR:
rsz04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
130512003
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130512003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIT_ATG1
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
130512003
NCBI-ProteinID:
XP_056866030
UniProt:
A0A9W3DQC5
LinkDB
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Position
4:<47562897..47564549
Genome browser
AA seq
424 aa
AA seq
DB search
MDGFHSSGSSPSGKMEEVSHDDSLPFFLDDDSSEPEGSPSYIKHASPMKSSYGFSVETRR
ERKEAAPSSPLKNMELNSRYSRVSHRADTDNFKFESHRLIDRNQFKPSSLPDSRLLNTQG
RVGDTPDSIDQDYVLISGPSVDIPSSSSGSPKLFNYPFKSHSPPVEFIKRNVTSPTAPMP
IAGATGRNIGRFAILESPNSLPGTSHGSLNLVDAFEQPSTNSLTRIRSLQKCAATIAELV
RERIESGKQLEAFSIQLVILAIWNQALHICHTQAASGVEGSLRQDGNRVRRNISQEGSEK
ILSQIQREFVQEVERAEELAKFVESGNTKMPDAMEIIFQAALTLGIRGGVDEVVMGEAEN
AVNLYAKAVRLLVFLVVEAQTLILNPPLTLTNSVRYRIRTYIDNLISRLKHLQSHKRSSG
PQKP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggatggttttcattcatcaggaagcagtccctcaggaaaaatggaagaagtttctcat
gatgactctttgcccttctttttagatgatgattctagtgaacctgagggaagcccttca
tatattaaacatgcttctccgatgaagtcatcttatggatttagtgttgagactagacgt
gagagaaaggaggcagcaccttctagtcctttgaaaaacatggaacttaattccagatac
agtagagttagtcatagagcagatactgataacttcaagttcgaaagccatagattaata
gatagaaaccaattcaaaccctcaagcttgcctgattccagattacttaatactcaagga
agagtaggggatactccagactcaatagatcaagattatgttctgatatctggaccatca
gtggatataccatcatcttcatctggttctcctaagcttttcaattacccattcaaatca
cattctcctcctgtggagttcattaaaagaaacgtaacgagtccaacggctcctatgcca
atagctggtgccactggcaggaacattggtcggtttgcaatcttggagagtccaaactct
ctcccgggtacttcccatgggtctctgaaccttgtggatgcttttgaacagccatcaact
aacagcttgacaagaatccggtctttgcagaaatgtgcagcgacgattgcagagttggtt
cgtgaaaggattgaatcaggtaaacagttagaagctttctctatccaactggtgattctt
gcaatttggaatcaagcactgcacatctgtcatactcaggcagcttctggtgtagaagga
agcctgcgccaagatggtaacagggtaagaagaaatattagccaagaaggatcagagaaa
atattgtctcagattcagagagagtttgtccaggaggttgagcgtgctgaagaacttgcc
aagtttgttgaatctggcaacacaaagatgccggatgcaatggagataatattccaagca
gctcttactcttggcatacgtggaggagtagatgaggtggtgatgggagaggcagagaac
gcagtaaacctctacgcaaaagcggtgcgcttgcttgtcttccttgtagtggaggcgcaa
acgctgattctaaatccacctttaacactcacaaattcagtaaggtatcgaatcagaaca
tatatagataacctcataagcagattaaaacatctacaatcacataaaagaagttcaggt
cctcagaaaccatga
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