Raphanus sativus (radish): 130512310
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Entry
130512310 CDS
T06014
Name
(RefSeq) nuclear transcription factor Y subunit A-2-like
KO
K08064
nuclear transcription factor Y, alpha
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
130512310
Transcription factors [BR:
rsz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
130512310
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GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
130512310
NCBI-ProteinID:
XP_056866104
UniProt:
A0A9W3DQN4
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Position
5:39039310..39041713
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AA seq
286 aa
AA seq
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MAMQTMREGLPSAPQISWWNAFGSQPLTPESLSGDSDSFAGAKVRSAGGIEQGVNKQSNS
ASHFAFSLGEVKSSRVVPKPQGSAFSMQPPYLELGFSQPQIYTKYPCVEQQYYGVLSAYG
PHSSVMLPLNMETEDGTIYVNSKQYHGIIRRRQSRAKAAAILDQNKPSSKFRKPYMHHSR
HLHALRRPRGSGGRFLNTKSQNNAKKADGTKQTMPQPQPQRSNSQDSDVLHPESMTMNLS
NRLGSEVTSMNYFLGSSLHPLGGMVMPSKWITATAAMDNGCCNFKT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctatgcaaactatgagagaaggtcttccctctgctccacagatttcttggtggaac
gcttttggatctcagccgttgactccggagagtctctctggagattctgattcgtttgcc
ggagctaaggtcagatctgctggagggatagaacaaggtgtgaataaacaaagcaactct
gcatctcactttgctttctcacttggtgaagtaaagagttcaagagttgttccaaagcct
caaggatctgctttctcaatgcaaccaccttacttggaacttggattttctcagccacag
atctacactaagtatccatgtgtggaacaacaatactatggagttctttcagcctatgga
cctcatagcagtgtcatgcttcctctaaacatggaaacagaagatggaactatctacgtt
aactcaaagcaataccatggaatcatcaggcgacgccaatcacgtgcaaaggctgctgct
attcttgatcagaacaaaccgagtagcaaattccgtaagccgtatatgcatcattcacgc
catctccatgcattgcgccgtcctagaggatctggtgggagattcttgaacactaaaagt
cagaacaatgcaaagaaagctgatggaactaagcagactatgcctcagcctcagccacag
cgaagtaactctcaggattcagatgttcttcatcctgaaagcatgaccatgaacttatca
aaccgactaggatcagaagttacaagcatgaactactttttaggctcttcactgcatccc
cttggtggcatggtaatgcctagcaagtggatcacagcaacagcagcaatggataatggc
tgctgtaatttcaagacctga
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