Raphanus sativus (radish): 130512596
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Entry
130512596 CDS
T06014
Name
(RefSeq) protein transport protein SEC13 homolog A-like
KO
K14004
protein transport protein SEC13
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130512596
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130512596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130512596
04131 Membrane trafficking [BR:
rsz04131
]
130512596
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130512596
Membrane trafficking [BR:
rsz04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
130512596
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130512596
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
130512596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WD40_2
Motif
Other DBs
NCBI-GeneID:
130512596
NCBI-ProteinID:
XP_056866725
UniProt:
A0A9W3DSC0
LinkDB
All DBs
Position
5:248812..250627
Genome browser
AA seq
303 aa
AA seq
DB search
MPPQKIETGHSDIVHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQQLATLTGHRGPVW
QVAWAHPKFDSLLASCSYDGQIIIWKEGNNQNEWTQAHVFNDHKVSVNSIAWAPHELGLS
LACGASDGNISVFSARADGGWDTTRIDQAHPVGVTSVSWAPATEPGALVSSGMHEPVYKL
ASGGCDSTVKVWKFANGSWKMDCFPALHKHKDWVRDVAWAPNLGLPKSTIASGSEDGSVI
IWTVGKEGEQWEGKVLKDFKTPVWRVTWSLTGNLLAVSDGNINVTLWKEAVDGEWEQVTV
VEP
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcctccacagaagatcgagactggtcacagcgacattgtccatgatgtcgtcatggat
tactatggaaagcgtgtagctactgcttcatcagactgcacaatcaagataaccggagta
agcaacagcggcggatcccagcagctagctaccttaaccggccaccgaggtcccgtctgg
caagtcgcctgggcccacccaaagttcgattcgctactagcttcgtgctcctacgatggg
cagatcataatatggaaagaaggaaacaaccaaaacgaatggacgcaggctcacgtcttc
aacgaccacaaagtatcagtcaactccatcgcttgggctcctcacgagctcggactctcc
ttagcttgcggagcatccgatggaaacatttctgttttctcagcgagagcagatggcggt
tgggacacaacgaggatagaccaagcgcatccggttggagtcacctcagtgtcatgggca
ccagcgactgagccaggtgcgctcgttagctccggtatgcacgaaccggtttataaatta
gcgtcgggagggtgtgatagtacggtgaaggtgtggaaattcgccaacgggtcgtggaag
atggactgtttcccggcgctccacaaacacaaggattgggtgagggacgtggcatgggca
ccgaacctgggtctgcctaagtcgacgatagcaagcgggtcggaagatgggagtgtgatc
atatggacggtagggaaagaaggagagcagtgggaaggaaaggttttgaaagatttcaag
acgccggtgtggagggtgacgtggtcgttgacgggtaatttactggcagtttctgacggg
aacattaacgtaacgttgtggaaagaggctgtggatggggagtgggagcaagtcactgtc
gttgagccatag
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integrated database retrieval system
