KEGG   Raphanus sativus (radish): 130512895
Entry
130512895         CDS       T06014                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130512895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    130512895
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     130512895
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     130512895
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 130512895
NCBI-ProteinID: XP_056867341
UniProt: A0A6J0NR69
LinkDB
Position
5:37278872..37280695
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDRKILVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDQ
YCDIPLGLYVIRGENVVLIGEMDTEREELPPHMVRVSETEIKRAQKVEREASELRGTMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggctggtcctgaagatatttacctttcaacttcactcgccagttatctcgat
agaaagatacttgtgctacttagagatggtagaaagctaatgggaacgctccgttctttt
gatcaatttgccaatgcggttctagaaggtgcttgcgaaagggtcattgtaggtgaccaa
tactgcgacattcctttaggcctctatgtaatccgtggagagaatgttgttctcattggt
gagatggacacagagagagaggagcttcctccacatatggttcgcgtctcagagaccgag
attaagagggcgcagaaagtggagagggaggcaagtgagctgagaggaacaatgaggaag
agaatggagtttcttgactttgattaa

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