Raphanus sativus (radish): 130512905
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Entry
130512905 CDS
T06014
Name
(RefSeq) long chain acyl-CoA synthetase 8-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00071
Fatty acid degradation
rsz01100
Metabolic pathways
rsz01212
Fatty acid metabolism
rsz04146
Peroxisome
Module
rsz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
130512905
00071 Fatty acid degradation
130512905
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130512905
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsz01004
]
130512905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
130512905
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
130512905
Lipid biosynthesis proteins [BR:
rsz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
130512905
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of breast milk
130512905
Exosomal proteins of breast cancer cells
130512905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4244
Motif
Other DBs
NCBI-GeneID:
130512905
NCBI-ProteinID:
XP_056867359
UniProt:
A0A9W3DUF7
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All DBs
Position
5:complement(34284628..34288151)
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AA seq
714 aa
AA seq
DB search
MEDPPMATSEYGLSTIIAGGVAALLVPILLSVVLTGTKKGKKRGVPVKVGGEEGYAMRHA
RGPDLVDVPWPGATTMAALFEQACKKYSSNRLLGTREFIDKEIVTSSDGRKFEKLHLGEY
RWQSYGEVFERVCNFASGLVGGVGHNVDTRVAIFSDTRAEWFIAFQGCFRQNLTVVTIYA
SLGEDALIYSLNETQVSTLICDSKQLKKLSAIQSSLKTVKNIIYIEEDGVEVASSDVNGL
GDITVSSIAEVEKLGKEKPVEPSFPSKNGVAVIMFTSGSTGLPKGVMITHGNLIGTAAGV
MKVIPKLNKNDVYIAYLPLAHVFELEAEIVVFTWGSAIGYGSAMTLTDTSNKIKKGTKGD
VSVLNPTLMTAVPAILDRVREGVLKKVEEKGGMAKTLFNFAYNRRLAAVNGSWFGAWGLE
KMFWDTLVFKKIRAVLGGRIRFMLVGGAPLSPDSQRFINICMGSPIGQGYGLTETCAGAT
FSEWDDPTVGRVGPPLPCGYIKLVSWEEGGYRVSDKPMPRGEIVVGGNSVTAGYFNNQEK
TDEVYKVDEKGTRWFYTGDIGRFHPDGCLEVIDRKKDIVKLQHGEYVSLGKVEAALGSSN
YVDNIMVHADPMNSYCVALVVPSHGAIEKWAEEAGVKSSDVSELCENGEAVKEVQQSLTK
AAKAAKLEKFEIPAKIKLLPEPWTPESGLVTAALKIKREQIKAKFKDELHKLYA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcctccaatggcgaccagcgagtacggactctccacgatcatagcaggcgga
gtcgccgctctactagtaccgatcctgctctccgtcgtgttaaccggaaccaaaaagggg
aagaagagaggcgttccggtgaaagtaggcggcgaggaaggctacgcgatgcgtcacgct
cgaggtcccgatctcgtcgacgtcccctggccaggagccacgacgatggccgccttgttt
gagcaggcttgcaagaagtactcgagcaaccggttgctcgggactagggagtttatagac
aaggagatcgtcacgtcgagtgacggcaggaagttcgagaagcttcatctcggggagtat
cggtggcagagctatggagaggtctttgaacgtgtttgtaacttcgcctcggggcttgtt
ggtggtgttggacataacgttgatactcgtgtcgctatcttttctgatactcgtgctgag
tggtttatcgcttttcagggatgtttcaggcagaatttaactgttgttactatctatgct
tctttaggagaggatgctttaatttactcactcaatgagactcaagtgtcgaccctgata
tgcgactcaaagcaactcaagaagttgtctgcgatacaatcaagcttgaagactgtaaag
aacattatttacattgaggaagatggagttgaggttgcttctagtgacgtgaatggtctt
ggtgacatcactgtttcgtccatcgctgaagttgagaaactggggaaggagaaacctgtt
gagccgagctttccttccaagaatggagttgctgttataatgtttaccagtggtagtacc
ggtctaccaaagggagttatgattacccacgggaatctaatcggaactgctgcaggagtt
atgaaggtgattccaaagctgaataagaatgacgtgtatattgcatatttacctttggcg
catgtgtttgagctggaagctgagattgtggtctttacatggggtagtgccatcggttat
ggctcagcaatgactttaactgacacttcaaataaaattaagaaaggaaccaaaggagat
gtttcagttctaaacccaactctcatgactgcagttccagctattcttgatcgtgtccgt
gaaggagttcttaaaaaggttgaggaaaagggtggcatggcgaagactctctttaacttt
gcttacaatcgccggttagcagctgtgaacggaagttggtttggtgcctggggtttggag
aaaatgttttgggatactctagtcttcaaaaaaatacgcgctgtgcttggaggacgcatc
cgatttatgctcgttggaggggctcctctgtctcctgattcgcaacgcttcatcaatatc
tgcatggggtctccaatcggtcaaggatatggattgactgaaacgtgtgctggagctacg
ttttctgagtgggacgaccctactgttggacgcgtgggaccaccactcccatgtggctac
attaagcttgtttcttgggaagaaggtggctatagagtttcagacaaaccaatgcctcga
ggggagattgtggtaggtggtaacagtgtaacagcaggttacttcaacaatcaagaaaaa
acagatgaggtttacaaggttgatgagaagggcacgaggtggttttacacaggagacatt
gggagattccacccggatggatgtcttgaagttattgacaggaagaaagatatcgttaaa
cttcaacatggggaatatgtatcccttggaaaggtggaggcagctttgggttcaagcaat
tacgttgacaacattatggtacacgcagacccaatgaacagctactgtgtcgctcttgtt
gtaccatcacacggagcaatagagaaatgggcagaggaagcaggagttaaatccagcgac
gtctctgagctatgcgagaacggtgaagcagtcaaggaggttcaacaatctcttaccaag
gcagcaaaggcggcaaagctagaaaagtttgaaatcccagcaaagataaagttattgccg
gagccgtggacaccagagtcgggactagtgacagctgctctcaaaataaagagggagcaa
ataaaggcaaagttcaaagatgaactccacaagctgtatgcctaa
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