Ramlibacter tataouinensis: Rta_00560
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Entry
Rta_00560 CDS
T01544
Name
(GenBank) Hypothetical protein
KO
K07114
Ca-activated chloride channel homolog
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rta02000
]
Rta_00560
Transporters [BR:
rta02000
]
Other transporters
Pores ion channels [TC:
1
]
Rta_00560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
VWA_3
VWA
VWA_2
VIT_2
VWA_CoxE
Motif
Other DBs
NCBI-ProteinID:
AEG91116
UniProt:
F5Y2E2
LinkDB
All DBs
Position
complement(59414..61516)
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AA seq
700 aa
AA seq
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MPSPAPCSAGLARWLWAAAAGLAATAVIALGTAAPAHAQDAAAPRATESPYFLVPGADPS
LDALPLKSTRVEVHIAGVIADVTVTQHYRNEGTRAIEARYLFPGSTRAAVHGLNVRLADR
LITADIREKRQARQEYAAARQEGKTAALLEQQLPNVFQMNVANILPGDEVKVELRYTELL
VPEAGRYQFVFPTVVGPRYNSPQSSQARTAWVAQPTLREGQASPAAFDLQLHIASPLAIQ
GVESPSHRIGVELEGERQAHVALQGEPGRPAGNRDFILHYRLAGEGIASGVLLYQGPQEN
FFLAMVQPPRQVDARAIPPRDYVFVVDISGSMHGFPLDTAKAVLRELIGGLRPSDTFNVL
LFSGSNRFLSPQPVPATRANLEQAIRTIEQMGGGGSTELIPALKRVYAQPKAADVSRTVV
VVTDGYVTVEREAFELVRRHLSQANVFAFGIGSSVNRHLIEGLARAGQGEPFVITQASQA
RDQATRFRRMIESPVLTSVTARFEGLEAYDVEPPQLPDVLAERPVVVFGKWRGNPGGQLV
VEGRAADGPYRQVVPIATVAGAGGAPQEGGDTRALRHLWARHRIAALSDQEALEGGDGQR
ERITALGLQYRLLTQYTSFLAVDRVVHHPRPQDGASVDQPQPLPEGVGERALGEAPVLAT
AVEVPGTPEPAAWGATAVALSMLAMLVRRQRRRNAARYTD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccccgccccctgcagcgccggcctggcgcgctggctctgggccgccgccgca
ggcctggccgccaccgccgtgatcgcgctgggcaccgccgcgccggcgcacgcgcaggac
gccgccgcgccgcgtgccaccgagagcccctacttcctcgtcccgggcgccgacccgtcg
ctggacgcgctgccgctcaagtccacccgggtcgaggtgcacatcgccggcgtgatcgcc
gacgtcaccgtcacccagcactaccgcaacgaaggcacgcgcgccatcgaggcccggtac
ctgttcccgggctcgacccgcgccgcggtccacggcctgaacgtgcgcctggccgaccgc
ctcatcaccgccgacatccgcgagaagcgccaggcgcgccaggaatacgccgcggcccgg
caggagggcaagaccgccgccctgctggagcagcagctgcccaacgtgttccagatgaac
gtggccaacatcctgcccggcgacgaggtgaaggtggagctgcgctacaccgagctgctg
gtgcccgaggccgggcgctaccagttcgtctttcccacggtggtcgggccgcgctacaac
agcccgcagtcgtcgcaggcacgcaccgcctgggtggcgcagcccacgctgcgcgagggc
caggcctcgcccgccgccttcgacctgcagctgcacatcgcctcgcccctggcgatccag
ggcgtggagtcgccctcgcaccggatcggcgtcgagctcgagggcgagcggcaggcccac
gtggcgctgcagggcgagccgggccgccccgccggcaaccgcgacttcatcctccactac
cggctggccggcgagggcatcgcctcgggcgtgctgctgtaccagggtccccaggagaac
ttcttcctggccatggtgcagccgccgcggcaggtcgatgcccgggccatcccgccgcgc
gactacgtcttcgtggtcgacatctccggctccatgcacggcttcccgctggacaccgcc
aaggccgtgctgcgcgagctgatcggcggcctgcggcccagcgacaccttcaacgtgctg
ctgttctccggcagcaaccgcttcctcagcccgcagccggtgccggccacgcgcgccaac
ctggagcaggccatccgcaccatcgagcagatgggcgggggcggcagcaccgagctgatc
ccggcgctcaagcgggtgtacgcgcagcccaaggcggccgacgtgtcgcgcacggtggtg
gtggtgaccgacggctacgtgacggtggagcgcgaggccttcgagctggtgcgccgccac
ctgtcgcaggccaacgtgttcgccttcggcatcggcagctcggtcaaccggcacctgatc
gagggcctggcgcgcgccggccagggcgagcccttcgtcatcacccaagcctcgcaggcg
cgggaccaggccacgcgcttccggcgcatgatcgagtcgcccgtgctcaccagcgtgacc
gcccgcttcgaggggctggaggcctacgacgtggagccgccccagctgcccgacgtgctg
gccgagcggccggtggtggtgttcggcaagtggcgcggcaaccccggcggccagctggtg
gtggagggccgcgcggccgacggcccgtaccgccaggtcgtgcccatcgcgacggtcgcg
ggcgccggcggcgccccgcaggaaggcggtgacacccgcgcgctgcgccacctctgggcc
cgccaccgcatcgcggcgctgtccgaccaggaggcgctggaaggcggcgacggccagcgc
gagcgcatcacggccctgggcctgcagtaccggctgctgacgcaatacaccagcttcctg
gcggtggaccgcgtggtgcaccacccgcggccgcaggacggcgcctccgtcgaccagccc
cagccgctgccggagggcgtgggcgagcgcgccctgggcgaggcgccggtgctcgccacc
gccgtggaagtgcccggcacgcccgagcccgccgcctggggcgccaccgcggtggcgctg
tccatgctggcgatgctggtgcgccgccagcgccgccgcaacgccgcgcgctacaccgac
tga
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