Ramlibacter tataouinensis: Rta_01100
Help
Entry
Rta_01100 CDS
T01544
Name
(GenBank) transcriptional regulator, LysR family-like protein
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rta03000
]
Rta_01100
Transcription factors [BR:
rta03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Rta_01100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AEG91172
UniProt:
F5Y385
LinkDB
All DBs
Position
107711..108754
Genome browser
AA seq
347 aa
AA seq
DB search
MNILSKANNGASIRDQTATAGCLSYRRDQRQADSAVCVFLRRGYHLFMDHKWLEDFVVLA
RERSFSRAAEQRHVTQPQFSRRIRALELWVGADLINRAGLPLSLTPAGEELLPVARRALA
GLAELRERIRGAQAGGDWVTLATGRTLSRTVAPAWLQRVQRAAGGFRLRILTGSIHEGAT
ALEQGAADFLLTFSHPRLPLLLDEARFEGLTVGTDELVAVSAPRPDGRPLHALPGTERRP
VLVLGYAPTLALHQILQDGLGRRAQAGRELHLRTAVESDFAESLHEQALQGVGLAWLPRA
LVATDLQARRLVAAEDGPGIAFEIRLLRPRQPRNALVQTVWTASSAG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgaacatcctttcaaaagcaaataatggtgccagtatccgcgatcagacggccacggcc
ggctgtctgtcgtatcgccgtgatcaacgacaagcggatagtgctgtatgcgttttcctc
aggcgtggctaccatctcttcatggaccacaagtggctcgaggacttcgttgtgctcgcc
cgcgagcgcagcttctcgcgtgccgccgagcagcggcatgtgacgcagccgcagttttcg
cgccgcatccgcgcgctggagctgtgggttggtgccgacctgatcaaccgcgccggcctg
ccgctgtcgctcacgccggcgggtgaagagctgctgcctgtggcgcgccgggcgctggcc
ggcctggccgagttgcgcgagcgcatccgcggcgcccaggccggcggcgactgggtcacg
ctggccaccggccgcaccctgtcgcgcaccgtggcgccggcatggctgcagcgggtgcaa
cgcgcggcgggcggctttcgtctgcgcatcctcaccggctccatccacgagggcgccacg
gcgctggagcagggcgcggccgacttcctgcttaccttctcgcacccgcgcctgccgctg
ctgctggacgaggcgcgcttcgagggcctgaccgtgggcaccgacgaactggtggccgtg
agcgcgccgcggcccgacggccggccgctgcacgcactgcccggcaccgagcgcaggccg
gtgctcgtgctgggttatgcgcccacgctggcgctgcaccagatcctgcaggacggcttg
ggccggcgcgcgcaggccgggcgcgagttgcacctgcgcaccgccgtggagtctgacttc
gccgagtcgctgcacgagcaggcgctgcaaggcgtgggcctggcctggctgccacgtgcg
ttggtggcgaccgacctgcaggcgcgccgcttggttgcggccgaggacgggcccggcatc
gctttcgagatccgcctgctgcgcccgcgccagccgcgcaacgcgctggtgcaaacggtg
tggacagccagctccgcaggttga
DBGET
integrated database retrieval system
