Ramlibacter tataouinensis: Rta_01840
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Entry
Rta_01840 CDS
T01544
Symbol
sms
Name
(GenBank) Candidate DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_01840 (sms)
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rta_01840 (sms)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_22
ChlI
AAA_16
Lon_C
DnaB_C
DUF7125
GvpD_P-loop
RecA
SLFN-g3_helicase
NTPase_1
AAA_30
nSTAND3
ABC_tran
AAA_24
AAA_29
AAA_14
NACHT
Motif
Other DBs
NCBI-ProteinID:
AEG91248
UniProt:
F5Y3X0
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All DBs
Position
187733..189145
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AA seq
470 aa
AA seq
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MNRHGLPTLAVMAKDKTIYSCTECGGSTPKWQGKCPHCNAWNTLVETVPEGAAGPGRNRF
AALASTSELAVLADIEAADVARTPTGIAELDRVLGGGIVEGGVVLIGGDPGIGKSTLLLQ
ALDGLQRADVPSLYVTGEESGAQVALRSRRLGLDNSQVKVLAEIQLEKILATLNAARPAV
AVIDSIQTVYSDQLTSAPGSVAQVRECAAHLTRAAKASGTSVVLVGHVTKEGALAGPRVL
EHMVDTVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTEKGLKGVANPSAIFLSQHAE
PVPGSCVLVTLEGTRPMLVEIQALVDSGGPSPRRLSVGLERDRLAMLLAVLHRHAGVACM
DQDVFVNAVGGVRISEPAADLAVMLAITSSLRGKPLPKGFIAFGEVGLAGEVRPAPRGQE
RLREAAKLGFSVAVVPKANAPKKGSRELEGLTIHPVERIEQAMDVVRGLA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcggcacgggctgcctacacttgcggtcatggccaaggacaagacgatctacagc
tgcaccgaatgcggcggcagcacccccaagtggcagggcaaatgcccgcactgcaacgcc
tggaacacgctggtggagacggtgccggagggcgcggcggggccgggccgcaaccgcttc
gccgcgctggcgtcgacttccgagctcgcggtgctggccgacatcgaggccgccgacgtg
gcgcgcacgcccaccggcatagccgagctggaccgggtgctgggcggcggcatcgtcgag
ggcggcgtggtgctgatcggcggcgaccccggcatcggcaagtccacgctgctgctgcag
gcgctggacgggctgcaaagggccgacgtgccctcgctgtacgtcaccggcgaggagtcg
ggcgcacaggtggcgctgcgctcgcgccggctcgggctggacaactcgcaggtgaaggtg
ctggccgagatccagctggagaagatcctggcgacgctcaacgccgcccggcctgcggtg
gccgtgatcgactccatccagaccgtctactccgaccagctcacctcggcgcctggctcg
gtggcgcaggtgcgcgaatgcgcggcgcacctcacgcgcgccgccaaggccagcggcacc
agcgtggtgctggtgggccacgtgaccaaggaaggcgccctggccggcccgcgcgtgctg
gagcacatggtggacaccgtgctgtacttcgagggcgacacccattccagcttccgcctg
gtgcgcgccatcaagaaccgcttcggcgccgtcaacgagatcggcgtgttcgccatgacg
gaaaagggcctcaagggcgtcgccaaccccagcgcgatctttttgtcgcagcacgccgag
ccggtgccgggcagctgcgtgctggtcacgctggagggcacgcgccccatgctggtggag
atccaggccctggtggacagcggcggccccagcccgcgccgcctgtcggtgggcctggag
cgcgaccgcctggccatgctgctggcggtgctgcaccgccacgccggcgtggcctgcatg
gaccaggacgtgttcgtcaacgcggtgggcggggtgcgcatcagcgagccggcggccgac
ctggcggtcatgctggccatcacctcgtccttgcgcggcaagcccctgcccaagggcttc
atcgccttcggcgaggtcggcctggccggcgaggtgcgccccgcgccgcgcggccaggag
cggctgcgcgaggcggccaagctcggtttttccgtcgccgtggtgcccaaggccaacgcg
cccaagaaaggcagccgcgagttggaagggctgaccatccacccggtggaacgcatcgag
caggcgatggacgtggtgcggggtttggcatga
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