Ramlibacter tataouinensis: Rta_02060
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Entry
Rta_02060 CDS
T01544
Symbol
trmU
Name
(GenBank) Candidate tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Rta_02060 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rta03016
]
Rta_02060 (trmU)
Enzymes [BR:
rta01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Rta_02060 (trmU)
Transfer RNA biogenesis [BR:
rta03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Rta_02060 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
Asn_synthase
ThiI
QueC
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AEG91269
UniProt:
F5Y3Z1
LinkDB
All DBs
Position
complement(209320..210444)
Genome browser
AA seq
374 aa
AA seq
DB search
MQRKSRVVVGLSGGVDSAVSAHLLKAQGHEVVGIFMKNWEDDDDGQYCSSNEDFVDAASV
ADVLGIEIEHVNFAAEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMRLGAN
KIATGHYARVRERDGRFELLKGLDETKDQSYFLHRLNQAQLGKTLFPVGELRKTEVRRIA
EAMALPNARKKDSTGICFIGERPFRDFLNRYISQEPGPIKDPGGRTIGQHQGLSFYTLGQ
RQGLGIGGVKDKGARRGGGEHAPWFVARKDIARNTLWVVQGHDHPWLLSSALEADDLSWI
AGEPPAAGRYGSKTRYRQADAPCVLEHPDGRLRLAFPDPQWAVTPGQSAVLYDGEVCLGG
GVIAAAVGVEAAVA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcaagtcccgtgtcgtcgtcggcctgagcggaggcgtggactccgcggtgtcg
gcgcacctgctcaaggcgcagggccacgaggtggtcggcatcttcatgaagaactgggag
gacgacgacgacggccaatactgctcgtccaacgaggacttcgtggacgcggccagcgtg
gccgacgtgctgggcatcgagatcgagcacgtcaatttcgccgccgagtacaaggaccgg
gtgttcgccgagttcctgcgcgagtaccaggccggccgcacgcccaacccggacgtgctg
tgcaacgccgagatcaagttcaaggccttcctcgaccatgccatgcggctgggcgccaac
aagatcgccaccggtcattacgcgagggtccgcgagcgggacggccgcttcgagttgctc
aagggcctggacgagaccaaggaccagagctacttcctgcaccgcctgaaccaggcccag
ctgggcaagactttgttcccggtgggcgagctgcgcaagaccgaggtgcggcgcatcgcc
gaggccatggccttgcccaacgccaggaagaaggactccaccggcatctgcttcatcggc
gagcggcccttccgcgacttcctcaaccgctatatcagccaggaacccgggccgatcaag
gacccgggcggccgcaccatcggccaacaccagggcctgtccttctacacgctggggcag
cgccaggggctgggcatcggtggggtcaaggacaagggagcccggcgcggcggcggcgag
cacgcgccctggttcgtggcgcgcaaggacatcgcccggaacacgctgtgggtggtgcag
ggccatgaccatccctggctgctgtcatccgccctggaggcggacgacctgagctggatc
gccggcgagccgcccgcggccggccgctacggttccaagacgcgctaccgccaggccgac
gcgccctgcgtgctggagcacccggacgggcgcttgcggctcgccttccccgatccgcag
tgggcggtcacccccgggcagtcggcggtgctgtacgacggcgaggtctgcttgggcggc
ggggtcatcgccgcggcggtgggcgtggaggcggcggtcgcctga
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