Ramlibacter tataouinensis: Rta_02330
Help
Entry
Rta_02330 CDS
T01544
Symbol
holA
Name
(GenBank) Candidate DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta03030
DNA replication
rta03430
Mismatch repair
rta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rta_02330 (holA)
03430 Mismatch repair
Rta_02330 (holA)
03440 Homologous recombination
Rta_02330 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rta03032
]
Rta_02330 (holA)
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_02330 (holA)
Enzymes [BR:
rta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rta_02330 (holA)
DNA replication proteins [BR:
rta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rta_02330 (holA)
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rta_02330 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AEG91297
UniProt:
F5Y419
LinkDB
All DBs
Position
234303..235391
Genome browser
AA seq
362 aa
AA seq
DB search
MQLAAAQLDAHLKKALRPLYTLHGDEPLLVQEAADAIRAAAREQGYTERTVHTVAGAYFD
WSAVLAAGGSLSLFADKQVVEVRIPSGKPGKDGSAALQQLAEQAQGGEGTLTLVLLPRLD
FATRKSAWFTALEGGGVAIELQPVERAALPQWIAQRLARQGQRVPAGEEGQRTLQFFADR
VEGNLLAAHQEIQKLGLLYPAGDGPESTRGVLGFEQVESAVLNVARYDVFKLSEAVLAGQ
AARVQRMLDGLQAEGEAEVLVHYTLAEDIRALKRVKDAMAAGRPLPVALREQRVWGVKER
LFERVLPRLSPLALDNLLQAAHRVDGIVKGLKSPDWPADGWQALHKLAMELCLAVAPART
KP
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgccgccgcccagctcgatgcgcacctgaagaaggcgctgcgcccgctctac
accctgcacggcgacgagccgctgctggtgcaggaagcggccgacgccatccgcgccgcg
gcccgggagcagggctacaccgagcgcacggtgcacacggtggccggcgcgtacttcgac
tggagcgcggtgctggcggccggcggctcgctcagcctgttcgccgacaagcaggtcgtc
gaagtccgcatcccttcgggcaagcccggcaaggacggcagcgccgcgctgcagcagctg
gccgagcaggcgcagggcggcgagggcacgctcaccctggtgctgctgccgcggctggac
ttcgcgaccaggaagtccgcctggttcacggctctggagggcggcggcgtcgccatcgag
ctgcagcccgtcgagcgcgccgcgctgccgcaatggatcgcgcagcgcctggcgcgccag
ggccagcgcgtgccggcgggcgaggaaggccagcgcacgctgcagttcttcgccgaccgg
gtggagggcaacctgctggcggcgcaccaggagatccagaagctgggcctgctgtacccc
gccggtgacggaccggaaagcacgcggggcgtgctggggttcgagcaggtcgagtcggcc
gtgctcaacgtggcgcgctacgacgtgttcaagctgtccgaggccgtgctggccggccag
gcggcgcgcgtgcagcgcatgctcgacggcctgcaggcagagggcgaggccgaggtgctg
gtgcactacacgctggccgaggacatccgcgcgctcaagcgcgtcaaggacgcgatggcg
gcgggccggccgctgccggtggccctgcgcgagcagcgcgtctggggcgtcaaggagcgg
ctgttcgagcgcgtgctgccgcggctgtcgccgctggcgctggacaacctgctgcaggcg
gcgcaccgggtggacggcatcgtcaagggcctgaagtcgccggactggccggccgacggc
tggcaggcgctgcacaagctggcgatggagctgtgcctggccgtcgcgccggcgcggacg
aagccctag
DBGET
integrated database retrieval system
