Ramlibacter tataouinensis: Rta_04180
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Entry
Rta_04180 CDS
T01544
Name
(GenBank) 4-coumarate--CoA ligase (4-coumaroyl-CoA synthase)-like protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00061
Fatty acid biosynthesis
rta00071
Fatty acid degradation
rta01100
Metabolic pathways
rta01212
Fatty acid metabolism
rta02024
Quorum sensing
rta04146
Peroxisome
Module
rta_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rta_04180
00071 Fatty acid degradation
Rta_04180
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rta_04180
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rta_04180
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rta01004
]
Rta_04180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rta04147
]
Rta_04180
Enzymes [BR:
rta01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rta_04180
Lipid biosynthesis proteins [BR:
rta01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rta_04180
Exosome [BR:
rta04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rta_04180
Exosomal proteins of breast cancer cells
Rta_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEG91489
UniProt:
F5Y5Y5
LinkDB
All DBs
Position
complement(425025..426581)
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AA seq
518 aa
AA seq
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MSTSLPAPAASGLPPFRAIADLVREHALARPRHTALIQGERRLPWGELDALADRVAASLQ
RDGVQPRQSVAVCAANGVEYVAVFLGALRAGVAVAPLPTGSLPQQLAGMVADSGAQRLFV
DAATPAFGTPGVPRTALDGSAGAGQPLAQWLAPAGSRPQPVVVEPNWPFNIIYSSGTTGM
PKGIVQPHAMRWAHVGRAAAGGYGTDTVALLATSLCSNTTLVCFFPALATGGTVALYEGR
FDAGRYLQLAERVRATHAMLVPVQYQRLMAHPQFDRFDLSSFRMKFCTSAPFAAALKADV
LARWPGGLVEYYGMTEGGGTCILEAHNFPHKLHTVGRPADGHDIRLIAEDGREVPPGGIG
EVVGRSASMMTGYHGQPGRTREAEWHDGEGRRYIRTGDVGRFDADGFLTLLDRRKDMVIS
GGFNIYPSDLEAVLRRHPGVADVAVVGVPSAEWGETPVAFVVPAAGAPDARALRAWANER
LGKTQRLADVRLLDELPRSDIGKVLKRQLREDYGAGTP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctccctccccgccccggccgcgtccggcctgccgcccttccgcgccatcgcc
gacctggtgcgcgagcacgccctggcgcggccgcggcacaccgcgctgatccagggcgag
cgccgcctgccctggggcgagctggacgccctggccgaccgcgtcgccgccagcctgcag
cgcgatggcgtgcagccgcgccagagcgtcgcggtctgcgcggccaacggcgtcgagtac
gtggcggtgttcctgggcgcgctgcgcgccggcgtggccgtggcgccgctgcccaccggc
tcgctgccgcagcagctggcgggcatggtggccgacagcggcgcgcagcgcctgttcgtc
gacgccgccacgcccgccttcggcacgcccggcgtgccgcgaaccgcgctggacggcagc
gccggcgcgggccagccgctggcgcaatggctggcgccggccggctcccgcccgcagccc
gtcgtggtcgagccgaactggcccttcaacatcatctactcctccggcaccaccggcatg
cccaagggcatcgtgcagccgcatgccatgcgctgggcccacgtgggccgcgccgccgcc
ggcggctacggcaccgacaccgtggccctgctggccacctcgctgtgctccaacaccacg
ctggtgtgcttcttccctgccctcgccacgggcggcaccgtcgccttgtacgaaggccgg
ttcgacgcaggccgctacctgcagctggccgaacgggtgcgcgccacccacgccatgctg
gtgccggtgcagtaccagcggctgatggcgcatccgcagttcgaccgcttcgacctgtcg
tccttccgcatgaagttctgcaccagcgcgcccttcgccgccgcgctcaaggccgacgtg
ctggcgcgctggcccggcgggctggtcgagtactacggcatgaccgagggcggcggcacc
tgcatcctggaggcgcacaacttcccgcacaagctgcacaccgtgggccggcccgccgac
ggccacgacatccgcctgatcgccgaggacgggcgcgaggtgccgccgggcggcatcggc
gaggtggtgggccgctcggcctccatgatgaccggctaccacggccagccgggcaggacg
cgcgaggccgagtggcacgacggcgagggccggcgctacatccgcaccggcgacgtgggc
cgcttcgacgccgacggcttcctgacgctgctggaccggcgcaaggacatggtgatcagc
ggcggcttcaacatctaccccagcgacctggaggccgtgctgcgccggcatcccggcgtg
gccgacgtggcggtggtgggcgtgccctcggccgagtggggcgagacgccggtggccttc
gtggtgcccgccgccggcgcgccggacgcccgggccttgcgcgcctgggccaacgagcgc
ctgggcaagacgcagcggctggcggatgtgcgcctgctggacgagctgccgcgcagcgac
atcggcaaggtgctcaagcgccagctgcgcgaggactacggtgccggcacaccctga
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