Ramlibacter tataouinensis: Rta_04870
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Entry
Rta_04870 CDS
T01544
Symbol
gcdH
Name
(GenBank) Candidate glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00071
Fatty acid degradation
rta00310
Lysine degradation
rta00362
Benzoate degradation
rta00380
Tryptophan metabolism
rta01100
Metabolic pathways
rta01110
Biosynthesis of secondary metabolites
rta01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
Rta_04870 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
Rta_04870 (gcdH)
00380 Tryptophan metabolism
Rta_04870 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rta_04870 (gcdH)
Enzymes [BR:
rta01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
Rta_04870 (gcdH)
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Paralog
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GFIT
Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
AEG91563
UniProt:
F5XVI7
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Position
complement(500585..501775)
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AA seq
396 aa
AA seq
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MQPQDHPRACWEDLLRIEEQLTEEERALQAALRRFAAGELAARVRELYRSETTPRELFLQ
FGGMGLLGATIQGWGCAGMNSVCAGLIGFELERVDSAFHTMVSSQSNLVMHAIHRFGSQA
QKDRYLPRLAAGEAIGCFGLTEPDHGSDPSRLASTARPHGDGFVLSGRKTWISNAPIADL
FVIWAKAGTPAMIRGFILERGMPGLSTAAITGKLGLRASATGDVVMDEVLVPPFQVLGDA
AGMRGPLACINKARYGLCWGAMGAATAVWHEARGYVLQRRQFGRPLAANQLVQKKLADMQ
TEIALGLAAALQAGRLLDQGRLPAEAIAMLKRNACGKALDIARTARDMLGGNGMSDAYSV
MRHMCNLEALNTYEGTSDVNALVLGHAQTGISAFSI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgcaggaccatccgcgcgcttgctgggaggatctgctgcgcatcgaggagcag
ctgaccgaggaagagcgcgcgctgcaggcggcgctgcgcaggttcgcggcgggcgagctg
gctgcgcgcgtgcgcgagctgtaccgcagcgagaccacgccacgcgagctgttcctgcag
ttcggcggcatggggctgctgggcgccaccatccagggctggggctgcgctggcatgaac
agcgtgtgcgccggcctgatcggcttcgagctggaacgcgtggattccgccttccacacc
atggtcagctcgcagtccaacctggtgatgcacgccatccaccgcttcggcagccaagcg
cagaaggaccgctacctgccgcgcctggccgcgggcgaggccatcggctgcttcggcctg
accgaacccgatcatggctccgaccccagccgcctggccagcaccgcgcgcccgcacgga
gatggcttcgtgctgtccggccgcaagacctggatcagcaacgcgccgatcgcggacctg
ttcgtgatctgggccaaggccggaacgccggcgatgatccgcggcttcatcctggagcgc
ggcatgccgggcctgtccaccgccgccatcacgggcaagctgggcctgcgcgcctccgcc
accggcgatgtggtgatggacgaggtgctcgtcccgcccttccaggtgctcggggacgcg
gcaggcatgcgcgggccgctggcctgcatcaacaaggcgcgctatggcctgtgctggggc
gccatgggcgcggccaccgccgtctggcacgaggcgcggggctacgtgctgcagcgccgc
cagttcggccggccacttgcagccaaccagctggtgcaaaagaagctggcggacatgcag
accgagatcgcgctgggactggcggccgcgctgcaggccgggcgcctgctggaccaggga
cggttgccggccgaagccattgccatgctcaagcgcaatgcgtgcggcaaggcgttggac
atcgcgcgcacggcgcgtgacatgctggggggcaacggcatgtcggacgcctactcggtg
atgcggcacatgtgcaacctggaggccctcaacacctatgaaggcaccagcgacgtcaac
gcgctggtcctcggccacgcgcagaccggcatctcggccttctcgatctga
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