Ramlibacter tataouinensis: Rta_05890
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Entry
Rta_05890 CDS
T01544
Name
(GenBank) transcriptional regulator, LysR family-like protein
KO
K16135
LysR family transcriptional regulator, transcriptional activator for dmlA
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rta03000
]
Rta_05890
Transcription factors [BR:
rta03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Rta_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_20
DUF2089
Motif
Other DBs
NCBI-ProteinID:
AEG91667
UniProt:
F5XW97
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All DBs
Position
615512..616420
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AA seq
302 aa
AA seq
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MAAPRAASADMQFFGTLVRCGSLAAAARELQVTPPAVSKRLAQLEQHLGTRLLSRTTRRI
GLTAEGEAYLAHARRILAEIAAVERELQGAREQPAGLLRVNATLGFGRLHIAPLVASFVR
GHPGVQVQLQLSASPPPLTQDAFDVCVRFGEPPDARVIARLLAPNRRLLCASPGYLARRG
TPRAPADLARHDTIAIRQGDEAYGVWRLRSGRRTETVKVHGPLSSNDGEIAVQWALAGHG
IVLRAEWDIARYLRSGRLREVLPNWQTPPADVYAVYPVQAQGAARVRAFVEYLAAELGKA
TG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccgcgcgcggcctcggccgacatgcagttcttcggcaccctggtgcgctgc
ggcagcctggccgcggcggcgcgcgagctgcaggtcacgccgccggcggtgagcaagcgc
ctggcgcagctggagcagcacctgggtacgcggttgctcagccgcaccacgcgccgcatc
ggcctcaccgccgaaggcgaggcctacctggcccacgcgcgccgcatcctggccgagatc
gcggccgtcgagcgcgagctgcagggcgcgcgcgagcagcccgccggcctgctgcgcgtg
aacgccacgctgggcttcggccgcctgcacatcgcgccgctggtggccagcttcgtgcgc
gggcacccgggcgtgcaggtgcaattgcagctgtcggccagcccgccgccgctgacgcag
gacgcgttcgacgtctgcgtgcgcttcggcgagccgcccgacgcgcgcgtcatcgcccgc
ctgctggcgcccaaccgccgcctgctgtgcgcctcgcccggctacctggcccggcgcggc
acgccccgggccccggccgacctggcgcgccacgacaccatcgccatccgccagggcgac
gaggcctacggcgtatggcggctgcgctcgggcaggcgcaccgagaccgtcaaggtgcac
ggacccttgagcagcaacgacggcgagatcgccgtgcagtgggcgctggccggccacggc
atcgtgctgcgggcggagtgggacatcgcccgctacctccgcagcggacggctgcgcgag
gtgctgccgaactggcagacgccgccggcggatgtgtacgcggtgtacccggtgcaggcg
cagggcgcggcccgggtgcgggcgttcgtggagtacctggcggcggagttgggcaaggca
acggggtag
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