Ramlibacter tataouinensis: Rta_08680
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Entry
Rta_08680 CDS
T01544
Symbol
rfbB
Name
(GenBank) candidate dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00521
Streptomycin biosynthesis
rta00523
Polyketide sugar unit biosynthesis
rta00525
Acarbose and validamycin biosynthesis
rta00541
Biosynthesis of various nucleotide sugars
rta01055
Biosynthesis of vancomycin group antibiotics
rta01100
Metabolic pathways
rta01110
Biosynthesis of secondary metabolites
rta01250
Biosynthesis of nucleotide sugars
Module
rta_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Rta_08680 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Rta_08680 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Rta_08680 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Rta_08680 (rfbB)
00525 Acarbose and validamycin biosynthesis
Rta_08680 (rfbB)
Enzymes [BR:
rta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Rta_08680 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AEG91950
UniProt:
F5XYW2
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All DBs
Position
898136..899203
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AA seq
355 aa
AA seq
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MILVTGGAGFIGSNFVLDWLAAGGEGVVNLDKLTYAGNLENLRSLEGNSRHVFVQGDIGD
QQLVRQLLARHRPRAVLNFAAESHVDRSIHAPGTFIETNVVGTFRLLEAVRAYWGELKGG
EREGFRLLHVSTDEVYGSLAPKDPAFTEQNKYEPNSPYSASKAASDHLVRAYHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGQQIRDWLYVGDHCSAIRRVLEA
GRLGETYNIGGWNEKPNLEIVQTVCNLLDELKPRAGGGSYREQITFVTDRPGHDRRYAID
ARKIERELGWKPAETFETGIRKTVRWYLEHGDWVQRVQSGAYREWMNTNYAARAA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgattttggttacaggcggggccggcttcatcggctccaacttcgttctggactggctg
gccgcgggtggcgagggcgtcgtcaacctcgacaagctgacctacgccggcaacctggag
aacctgcgttccctggaaggcaactcccggcatgtcttcgtgcagggtgatatcggcgat
cagcagttggtgaggcaactgctggcccggcatcgcccgcgagcggtgttgaacttcgca
gccgaatcccacgtggaccgctccatccacgcgcccggcaccttcatcgagaccaacgtg
gtcggcaccttccgcctgctggaggccgtgcgggcgtactggggcgagctgaagggcggc
gagcgcgagggctttcgcctgctgcacgtgtctaccgacgaggtgtacggctcgctggct
ccgaaggatccggccttcaccgagcagaacaagtacgagccgaacagcccctactcggcc
agcaaggcggccagcgaccacctggtgagggcctaccaccacacctacggcctgccggtc
ctgaccaccaactgctccaacaactacggtccgtaccactttcccgagaagctgatcccg
ctgatgatcgtgaacgccctggcgggcaagccgctgccggtgtacggcgacggccagcag
atcagggactggctgtacgtgggcgaccattgcagcgccatccgccgcgtgctggaggcc
ggccgtctgggcgagacctacaacatcggcggctggaacgagaagcccaaccttgagatc
gtgcagacggtgtgcaacctgttggacgagctcaagccgcgcgccggcggcggcagctac
cgcgagcagatcaccttcgtgactgaccgcccgggtcatgaccgccgctacgccatcgac
gcccgcaagatcgagcgcgagctgggctggaagccggcggagacctttgagaccggcatc
cgcaagacggtgcgctggtacctggagcacggcgactgggtgcagcgcgtgcagagcggc
gcctaccgcgagtggatgaacaccaattacgccgcgcgcgctgcctga
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