Ramlibacter tataouinensis: Rta_09680
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Entry
Rta_09680 CDS
T01544
Symbol
murD
Name
(GenBank) Candidate UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (D-glutamic acid adding enzyme)
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00470
D-Amino acid metabolism
rta00550
Peptidoglycan biosynthesis
rta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rta_09680 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rta_09680 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rta01011
]
Rta_09680 (murD)
Enzymes [BR:
rta01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Rta_09680 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rta01011
]
Precursor biosynthesis
Amino acid ligase
Rta_09680 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_7
ThiF
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AEG92052
UniProt:
F5XZM3
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All DBs
Position
999983..1001515
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AA seq
510 aa
AA seq
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MGRPGEGWSALQDQHVLVLGLGASGLAMARWCARGGARVTVADTREAPPQVAALREQLPQ
ASFVAGPFTGALLEGVQAVFRSPGLAPAQVAPVWDAARAAGLRVGGELSLFCGGLAQLQA
EQGYAPAVLAVTGTNGKTTVTSLAGQLVERSGRTVAVAGNIGPTLLDTLAAKMDAQALPQ
VWVLELSSFQLEGMEGFEPTAATVLNLTQDHLDWHGGMRAYAAAKARIFGTRGLMVLNRE
DPAVMAMLPAPAKLKGGKTEQREHVGFGADMPQRPGDYGIEVVNGMAWLVRALEADETQK
RRRDADEEIHIQRLMPADALRIRGRHNAVNALAALALATAAGCPLAPMLYGLREYRGEPH
RVEPVGMVGEVEFFDDSKGTNVGATAAALNGLGAERKLVVILGGEGKGQDFSPLAAPVAR
FCRAAVLIGRDAPQIRAALEGAGVALLDAASMEEAVSLATQRSQPGDAVLMSPACASFDM
FRNYEHRAEVFREAVARLAAEAGTSLEVVQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttggggcggcccggcgaaggctggtccgccctccaggaccagcacgtcctcgtcctcggc
ctcggcgcgtccgggctggcgatggcgcgctggtgcgcgcgcggcggcgcgcgcgtgacc
gtggcggacacgcgcgaggcgccgccgcaggtggccgcgctgcgcgagcagctgccgcag
gcctcgttcgtcgccggccccttcaccggggcgctgctggagggcgtgcaggccgtgttc
cgcagccccgggctggcgccggcgcaggtggccccggtgtgggacgccgcccgcgcggcc
ggcctgcgggtcggcggcgagctgagcctgttctgcggcgggctggcccagctgcaggcc
gaacagggttacgcgccggcggtgctggccgtcaccggcaccaacggcaagaccacggtc
acctcgctggccggccagctggtggaacgcagcggccgcacggtggcggtggccggcaac
atcggccctacgctgctggacacgctggccgcgaagatggacgcgcaggcgctgccgcag
gtctgggtgctggagctgtccagcttccagctcgagggcatggaaggcttcgagcccacc
gcggccacggtgctcaacctcacccaggaccatctggactggcacggcggcatgcgggcc
tacgcggcggccaaggcccgcatcttcggcacccgcggcctcatggtcctgaaccgggaa
gaccccgcggtgatggccatgctgccggcgccggccaagctcaagggcggcaagaccgag
cagcgcgagcatgtgggcttcggcgccgacatgccgcagcgtcccggcgactacggcatc
gaggtggtcaacggcatggcatggctggtgcgcgcgctggaagccgacgagacgcaaaag
cgccggcgcgatgccgacgaagagatccacatccagcgcctgatgccggccgacgcgctg
cgcatccgcggccgccacaacgcggtgaacgcgctggccgcgctggccctggcgacggcg
gccggctgcccgctggcgcccatgctgtacggcctgcgcgagtaccgcggcgagccgcac
cgggtcgagccggtgggcatggtgggcgaggtcgagtttttcgacgacagcaagggcacc
aacgtcggcgccaccgcggcggcgctgaatggtctcggtgccgagcgcaagctggtcgtg
atcctggggggcgagggcaaggggcaggacttctccccgctggccgcgccggtggcgcgc
ttctgccgggcggctgtgctgatcggccgcgacgcgccgcagatccgcgccgcgctggaa
ggcgcgggggtggcgctgctggacgccgcctcgatggaggaggcggtctcgctggccacg
cagcgcagccagcccggcgacgccgtgctgatgtcgccggcctgcgccagcttcgacatg
ttccgcaactacgagcaccgcgccgaggtgttccgcgaggccgtggcccggctcgcggcc
gaggccgggacctcgctggaggttgtccaatga
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