Ramlibacter tataouinensis: Rta_09720
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Entry
Rta_09720 CDS
T01544
Symbol
ddlA
Name
(GenBank) Candidate D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00470
D-Amino acid metabolism
rta00550
Peptidoglycan biosynthesis
rta01100
Metabolic pathways
rta01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rta_09720 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rta_09720 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rta_09720 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rta01011
]
Rta_09720 (ddlA)
Enzymes [BR:
rta01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Rta_09720 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rta01011
]
Precursor biosynthesis
Amino acid ligase
Rta_09720 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
RimK
TTL
Neuropep_like
Motif
Other DBs
NCBI-ProteinID:
AEG92056
UniProt:
F5XZM7
LinkDB
All DBs
Position
1005232..1006203
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AA seq
323 aa
AA seq
DB search
MSGTFNFGKVAVLMGGQSAEREVSLMSGSGVLKALQAKGVDAHAFDPAQRDLSELKREGF
GRCFIALHGRFGEDGTVQGALELLGIPYTGSGVMASSIAIDKVMTKRVWLAEGIPTPKYR
LLRRGAYQRGQVVRIPDELGLPLIVKPAREGSSIGVAKVQGYSEMQGAVDAAAALDADVL
CEQFVSGDEVTCPILGTGDAARALPVIRIVAPAGNYDYQNKYFTDDTQYLVPCGLPAGEE
AAIQALVLKAYRVLGCRGWGRIDVMIDGRTRQPSLLEINTSPGMTGHSLVPMSARAAGIS
YEDLCVQLLASATLDHAKEAAIP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtaccttcaactttggaaaggtggctgtcctgatgggcggccagtcggccgag
cgcgaggtgtcgctcatgtccggcagcggcgtgctcaaggcgctgcaagccaagggcgtg
gacgcgcacgccttcgatccggcgcagcgcgacctgtccgagctcaagcgcgagggcttc
gggcgctgcttcatcgccctgcacggccgcttcggcgaggacggcacggtgcagggcgcg
ctggagctgctgggcatcccctacaccggctcgggcgtgatggcctcgtccatcgccatc
gacaaggtcatgaccaagcgggtctggctggccgagggcatcccgacgccgaagtaccgg
ctgctgcggcgcggcgcctaccagcgcgggcaggtggtccgcatccccgacgagctgggc
ctgccgctgatcgtcaagccggcgcgcgagggctcgtccatcggcgtcgccaaggtccag
ggctattccgagatgcagggggccgtggacgcggccgccgcgctggatgccgacgtgctg
tgcgagcagttcgtctcgggcgacgaggtgacctgcccgatcctgggaacgggcgacgcg
gcgcgcgcgctgcccgtcatccgcatcgtcgcgccggcgggcaactacgactaccagaac
aagtacttcaccgacgacacccagtacctggtgccctgcggcctgccggcgggcgaggag
gcggccatccaggcgctggtgctcaaggcctaccgcgtgctgggctgccgcggctggggc
cgcatcgacgtgatgatcgacggcaggacgcgccagccctcgctgctggagatcaacacc
tcgccgggcatgaccgggcactcgctggtgcccatgtcggcgcgtgccgccggcatcagc
tacgaggacctgtgcgtccagctgctggcctcggccacgctggaccatgccaaggaggcg
gccatcccatga
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