Ramlibacter tataouinensis: Rta_12340
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Entry
Rta_12340 CDS
T01544
Name
(GenBank) conserved hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rta02044
]
Rta_12340
02035 Bacterial motility proteins [BR:
rta02035
]
Rta_12340
Secretion system [BR:
rta02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Rta_12340
Bacterial motility proteins [BR:
rta02035
]
Pilus system
Pilus assembly proteins
Rta_12340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AEG92319
UniProt:
F5Y1R8
LinkDB
All DBs
Position
1259342..1262587
Genome browser
AA seq
1081 aa
AA seq
DB search
MTHLFRRIAPGRGTVVLAALALAFGGALAQKIDDVPPAVQNNVAPNFMFMIDNSGSMNNI
VPAAPYSPSATYFGNCSSPIPIPPSGANPPSIDIRVVDGEPRFVSNGTTYRHVTVDSRGR
CFHNNVTYSARLLGNGGSSDDRMPTGYLDSEYSGHFLNWYFGNYGGPVTGWGNRKRLASG
LVETRMEIARRAAKSTIDSLPVQATGARPVVRVGLSSYRRTSDGGALRVDMSDFNAALRS
SLKTSIDALQAEASTPLASTLADIGRYLATGYNGDITTARTNSVNIDTLLRLNGTDNATR
NACLAGAASCTGSSSPRPIQYWCQRSSIFAMTDGRPQSDRAFNSNTYIRDYDGDCSGVND
TNCVNKGAAGSWDRKIGRTYESAGSDYMDDVAKLLFDADWRPDLAKPAPTGSEPRAKNNI
STYMIGFADPTVQNDPLLINTARQGGGKFIAATDSDTLVDAFRTVIADAIAKDAAAAAVA
VTNAQITAGTVGYASSYKSGSWYGDLEAYSLDITTGLQNGTASWFAKDRLNAMAPASRKI
ASWNGTTGVPFTTASGTALRATTPGLTDALIDYTRGVRHGEDVSFRARTFLLGDIINAEP
VVVNYPAGPVVYQAANDGMLHAFDGRVEASADTRGQELWAYVPRLIHGKLAGRASLAFEH
EYLVDGTPATAAVTGVGDVRHLLVGGLGKGGAGFYALDVTSGTAATEADAVAKVLWEFRP
ANMGYSFGIPLIVNTSAGWRVVVTSGLRNDTGSEGLGGDGRGRVWVLNPANGNVEKEFIT
PAGFGSAAAGLGLAHLAKPANLAASAVVRHVYGGDLQGNVWRFDLNAPTLSAPVRVAAAV
DRAGLPQPITAPPVVSPVLGSATRMFIYFGTGQYFSIDDVPGTGAPNANASQQQTIYGIV
DDTSVASPALPDIRGSNGASCPSNGGNGELVCQFATQSTPGGPINVSHNAVDLSSRRGFY
LDIPIAGGRVNTQPALTAGGTLVIVVNQPSNADCNPGGSSYLFQLSAATGGAVIKTPGGS
DYYDSVFFIANALSSRPVIVITANGPRALLRLSDKTTQSREIDETANSNPAFRRIYMRPL
N
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgacccacctctttcgcaggatcgcgcccggccgcggtacggttgtgctggccgcgctg
gcgctggccttcggcggcgcgctcgcgcagaagatcgacgacgtcccgcccgcggtccag
aacaacgtcgctccgaacttcatgttcatgatcgacaactccggctcgatgaacaacatc
gtgccggcggcgccgtattcgccttcggccacttacttcggcaactgcagcagcccgatt
ccaatcccgccttcgggtgccaaccccccgtccatcgatatccgcgtcgtcgatggtgag
ccgcgcttcgtctccaacggcacgacgtaccggcatgtcaccgtggacagcaggggtcgc
tgcttccacaacaacgtcacgtacagcgcccggttgctgggcaacgggggttccagcgat
gaccgcatgcccacgggttacctggactcggaatacagcggccacttcctgaactggtat
ttcggcaattacggcggtccggtcacgggctggggcaaccgcaagcgcttggcgtcgggc
ctggtcgaaacgcgcatggagatcgcccgccgtgcggccaagagcaccatcgattcgctg
ccggtgcaggccaccggtgcgcgcccggtggtgcgggtgggcctcagcagctaccgacgc
acgtcggacggcggggcgcttcgtgtcgatatgagtgacttcaatgcggccttgcgcagt
tccctcaaaaccagcattgatgctcttcaggccgaagcctcgacgccgctggcctccacg
ctggccgacatcgggcgctacctggccaccggctacaacggtgacatcacgactgcccgc
accaacagcgtcaacatcgacacgctgctgcgcctgaacggtacggacaacgccacacgc
aatgcctgcttggccggcgccgcgtcatgcaccggcagttcgtcgccccggcccatccag
tactggtgccagcgctcgtccatcttcgccatgaccgacggccgcccgcagagcgatcgc
gctttcaacagcaacacctacatccgggactatgacggcgactgctccggtgtgaacgac
accaactgcgtgaacaagggcgcggcgggttcctgggaccgcaagatcgggcgcacctat
gagagcgcaggctccgactacatggacgacgtggccaagctgctgttcgacgccgactgg
cggccggacctggccaagcccgcgcccacgggctcggagccgcgggccaagaacaacatc
agcacctacatgatcggcttcgccgacccgacggtgcagaacgacccgctactgatcaac
acggcgcggcagggcggcggcaagttcatcgccgccaccgactccgacaccctggtcgac
gccttccgcaccgtcatcgccgatgccatcgccaaggacgccgccgccgccgcggtggcc
gtgaccaacgcgcagatcacggccggcacggtgggctacgcctccagctacaagtcgggc
agctggtacggcgacctggaggcctactcgctggacatcaccacgggcctgcagaacggc
acggcgagctggttcgccaaggaccggctgaacgcgatggcgccggcgtcgcgcaagatc
gcctcctggaacggcacgaccggcgtgcctttcaccaccgccagcggcacggcgctgcgc
gccaccacgcccggcctcaccgacgccctgatcgactatacgcgcggcgtgcgccacggc
gaggacgtgagcttccgcgcgcgcaccttcctgctgggcgacatcatcaacgccgagccg
gtggtggtgaactaccccgccggcccggtcgtgtaccaggcggccaacgacggcatgctg
cacgccttcgacggccgcgtggaggccagcgcggacacccggggccaggagctgtgggcc
tacgtcccgcgcctgatccacggcaagctggctggccgcgccagcctggccttcgagcac
gaatacctggtggacggcacgcccgcgacggcggccgtcacgggggtgggggatgtccgc
cacctgctcgtcggcgggctgggcaagggcggtgccggtttctatgccctggacgtcacc
agcggcactgcggccacggaggccgacgccgtcgccaaggtgctgtgggagttccggccg
gcgaacatgggctattccttcggcatccccttgatcgtgaacacctccgccggatggagg
gtggtggtgacctccggcttgcgcaacgacaccggcagcgaaggcctgggcggtgacggc
cggggccgggtgtgggtgctcaatcccgccaacggcaacgtcgagaaggagttcatcaca
cccgccggcttcggcagcgccgccgccggcctgggacttgcccacctggccaagccggcg
aacctcgccgccagtgccgtggtgcgccatgtctacgggggcgacctgcagggcaacgtc
tggcgcttcgacctgaacgcgcccacgctctcggcgccggtgcgcgtggccgcggcggtg
gaccgtgccggcctgccccagcccatcaccgcgccgccggtggtttccccggtcctcggc
agcgcgacccggatgttcatctacttcggcaccggccagtacttctccatcgacgacgtg
ccggggaccggggcgcccaacgccaatgccagccagcagcagaccatctacggcatcgtc
gacgacaccagcgtggcctcgcccgcgctgccggacatccgcggctccaacggggcgagt
tgccccagcaacggcggcaacggcgagctggtgtgccagttcgccacccagtccaccccg
ggcggcccgatcaacgtgagccacaacgccgtggacctgagcagccggcgtggcttctac
ctcgacatcccgatcgcgggcggccgggtgaacacgcagcccgcgctgaccgcgggcggt
acgctcgtcatcgtcgtcaaccagccttccaatgcggactgcaacccgggcggctccagc
tacctgttccagctgtccgccgccaccggcggcgcggtgatcaagaccccgggaggcagc
gactactacgattccgtcttcttcatcgccaacgcgctgtcgagccggccggtgatcgtg
atcaccgccaatgggccgcgcgcgctgctgcggctgtcggacaagacgacgcagagccgc
gagatcgacgagaccgccaacagcaacccggctttccgccggatctacatgcggcccctg
aactga
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