Ramlibacter tataouinensis: Rta_13080
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Entry
Rta_13080 CDS
T01544
Symbol
xseB
Name
(GenBank) Candidate exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Rta_13080 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_13080 (xseB)
Enzymes [BR:
rta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Rta_13080 (xseB)
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Rta_13080 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Nsp1_C
Motif
Other DBs
NCBI-ProteinID:
AEG92395
UniProt:
F5Y2N2
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All DBs
Position
1357860..1358087
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AA seq
75 aa
AA seq
DB search
MSQAPSPPPATYEAALEELEQLIGRIESGQLPLEQLLAGYERGAQLLAFCRGKLEAVENQ
IKVLDEGTLKPWAQP
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggccccgtccccaccgcccgccacgtatgaggctgccctggaagagctggag
cagctgatcggccggatcgaatcgggacagctgccgctggagcagctgctggcgggctac
gagcgcggcgcgcagctgctggcgttctgccgcggcaagctcgaggcggtggagaaccag
atcaaggtgctggacgaaggcacgctcaagccatgggcacagccatga
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