Ramlibacter tataouinensis: Rta_13630
Help
Entry
Rta_13630 CDS
T01544
Symbol
ihfB
Name
(GenBank) Candidate integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rta03032
]
Rta_13630 (ihfB)
03036 Chromosome and associated proteins [BR:
rta03036
]
Rta_13630 (ihfB)
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_13630 (ihfB)
DNA replication proteins [BR:
rta03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rta_13630 (ihfB)
Chromosome and associated proteins [BR:
rta03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Rta_13630 (ihfB)
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Rta_13630 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AEG92449
UniProt:
F5Y3H5
LinkDB
All DBs
Position
complement(1423167..1423493)
Genome browser
AA seq
108 aa
AA seq
DB search
MFSSVMTRSDLVEELAARFSQLTHRDAEYAVKTILDAMSEALVRGHRIEIRGFGSFSINR
RPPRMGRNPRSGESVQIPEKRVPHFKPGKALREAVDQRTAEIEADGQR
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcctccgttatgacccgatccgacctcgtcgaggaactggccgcccgtttcagc
cagctcacgcaccgcgacgccgagtacgccgtcaagaccattctcgacgcgatgagcgag
gcgctggtgcgcgggcaccgcatcgagatccgcggcttcggcagcttctcgatcaaccgc
cggccgccgcgcatggggcgcaacccgcgctccggcgaaagcgtgcagatcccggaaaag
cgcgttccccacttcaagccgggcaaggccctgcgcgaggcggtggaccagcgcaccgcc
gagatcgaggccgacggccagcgctag
DBGET
integrated database retrieval system
